RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Rims1Q99NE5 1463 aa9.38□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Esx1O88933 382 aa9.38□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Talpid3E9PV87 1520 aa9.38□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Safb2Q80YR5 991 aaKnown RBP9.37□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Sart3Q9JLI8 962 aaKnown RBP9.37□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Kif7B7ZNG0 1348 aa9.37□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Cdk5rap2Q8K389 1822 aa9.37□□□□□ -0.91
Clrn1-202ENSMUST00000055636 IqubQ8CDK3 788 aa9.37□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Setd1aE9PYH6 1716 aa9.37□□□□□ -0.91
Clrn1-202ENSMUST00000055636 NpatQ8BMA5 1420 aa9.37□□□□□ -0.91
Clrn1-202ENSMUST00000055636 CanxP35564 591 aaKnown RBP9.37□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Kiaa0556Q8C753 1610 aa9.37□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Hfm1D3Z4R1 1434 aa9.36□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Prdm2A2A7B5 1709 aaKnown RBP9.36□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Zmym4A2A791 1549 aaKnown RBP9.36□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Utp14aQ640M1 767 aaKnown RBP9.36□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Ppp2r1aQ76MZ3 589 aa9.36□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Cep152A2AUM9 1736 aaKnown RBP9.35□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Txndc2Q6P902 515 aa9.35□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Efcab6Q6P1E8 1516 aa9.35□□□□□ -0.91
Clrn1-202ENSMUST00000055636 CltcQ68FD5 1675 aaKnown RBP9.35□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Ino80Q6ZPV2 1559 aa9.35□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Exosc9Q9JHI7 438 aaKnown RBP9.35□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Gm16486A0A1D5RMD1 1434 aa9.35□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Lrrc7Q80TE7 1490 aa9.34□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Ercc6l2Q9JIM3 1537 aa9.34□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Znf316Q6PGE4 1016 aa9.34□□□□□ -0.91
Clrn1-202ENSMUST00000055636 CrbnQ8C7D2 445 aa9.34□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Nlrp6Q91WS2 869 aa9.34□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Nphp4P59240 1425 aa9.34□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Kdm2bQ6P1G2 1309 aa9.34□□□□□ -0.91
Clrn1-202ENSMUST00000055636 Ahdc1Q6PAL7 1594 aaKnown RBP9.33□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Mroh1E0CZ22 1640 aa9.33□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Dbr1Q923B1 550 aa9.33□□□□□ -0.92
Clrn1-202ENSMUST00000055636 PtprmP28828 1452 aa9.33□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Pola1P33609 1465 aa9.33□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Myom2Q14BI5 1463 aa9.33□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Pcdh10E9PXQ7 1057 aa9.33□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Tecpr2Q3UH45 1423 aa9.32□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Psme1P97371 249 aa9.32□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Ipo4Q8VI75 1082 aa9.32□□□□□ -0.92
Clrn1-202ENSMUST00000055636 BccipQ9CWI3 316 aa9.32□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Trpm1Q2TV84 1622 aa9.32□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Arid3aQ62431 601 aa9.32□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Stard8Q8K031 1019 aa9.32□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Atp2b2Q9R0K7 1198 aa9.31□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Sbno1Q689Z5 1390 aa9.31□□□□□ -0.92
Clrn1-202ENSMUST00000055636 MyclP10166 368 aa9.31□□□□□ -0.92
Clrn1-202ENSMUST00000055636 PalldQ9ET54 1408 aa9.31□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Cep170bQ80U49 1574 aa9.31□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Neurod2Q62414 383 aa9.3□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Slc52a2Q9D8F3 450 aa9.3□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Kif16bB1AVY7 1312 aa9.3□□□□□ -0.92
Clrn1-202ENSMUST00000055636 NudcO35685 332 aaKnown RBP9.3□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Dnai1Q8C0M8 701 aa9.3□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Kif13aQ9EQW7 1749 aa9.3□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Itsn2Q9Z0R6 1659 aa9.3□□□□□ -0.92
Clrn1-202ENSMUST00000055636 IghaA0A0A6YXW6 389 aa9.3□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Naip7Q9JIB3 1402 aa9.29□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Rab3gap2Q8BMG7 1366 aa9.29□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Ttc41Q692V3 1318 aa9.29□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Tex14Q7M6U3 1450 aa9.29□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Adamts7Q68SA9 1657 aa9.29□□□□□ -0.92
Clrn1-202ENSMUST00000055636 CenpjQ569L8 1344 aa9.29□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Mre11Q61216 706 aa9.28□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Kcnn1Q9EQR3 537 aa9.28□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Uggt1Q6P5E4 1551 aa9.28□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Cdk19Q8BWD8 501 aa9.28□□□□□ -0.92
Clrn1-202ENSMUST00000055636 EspnQ9ET47 871 aa9.28□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Arid4bA2CG63 1314 aaKnown RBP9.28□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Myom1Q62234 1667 aaKnown RBP9.28□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Chmp5Q9D7S9 219 aa9.28□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Mbd3Q9Z2D8 285 aaKnown RBP9.28□□□□□ -0.92
Clrn1-202ENSMUST00000055636 Sipa1l1Q8C0T5 1782 aa9.27□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Kdm5aQ3UXZ9 1690 aa9.27□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Pdlim2Q8R1G6 349 aa9.27□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Apbb1Q9QXJ1 710 aa9.27□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Plxnc1Q9QZC2 1574 aa9.26□□□□□ -0.93
Clrn1-202ENSMUST00000055636 NgefQ8CHT1 710 aa9.26□□□□□ -0.93
Clrn1-202ENSMUST00000055636 P2rx7Q9Z1M0 595 aa9.26□□□□□ -0.93
Clrn1-202ENSMUST00000055636 DnmbpQ6TXD4 1580 aa9.26□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Eif2s2Q99L45 331 aaKnown RBP9.25□□□□□ -0.93
Clrn1-202ENSMUST00000055636 HnrnpmQ9D0E1 729 aaKnown RBP9.25□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Gsto1O09131 240 aa9.25□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Speer4f1Q9D5Q6 258 aa9.25□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Arhgap23Q69ZH9 1483 aa9.24□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Itsn1Q9Z0R4 1714 aa9.24□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Rsph4aQ8BYM7 716 aa9.24□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Smc5Q8CG46 1101 aaKnown RBP9.24□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Rwdd1Q9CQK7 243 aa9.24□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Plekhh1Q80TI1 1356 aa9.24□□□□□ -0.93
Clrn1-202ENSMUST00000055636 MlecQ6ZQI3 291 aaKnown RBP9.23□□□□□ -0.93
Clrn1-202ENSMUST00000055636 InsrP15208 1372 aa9.23□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Ppm1gQ61074 542 aa9.23□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Gtf3c5Q8R2T8 520 aa9.23□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Apaf1O88879 1249 aa9.22□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Golga2Q921M4 999 aa9.22□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Zmym3Q9JLM4 1370 aa9.22□□□□□ -0.93
Clrn1-202ENSMUST00000055636 RictorQ6QI06 1708 aa9.22□□□□□ -0.93
Clrn1-202ENSMUST00000055636 Kiaa1107Q80TK0 1369 aa9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms