RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Pank1Q8K4K6 548 aa11.83□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Dnttip2Q8R2M2 758 aaKnown RBP11.83□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Armcx1Q9CX83 456 aa11.83□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Rnf17Q99MV7 1640 aa11.82□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 DnmbpQ6TXD4 1580 aa11.82□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Myo5cE9Q1F5 1742 aa11.82□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Mapk8ip3Q9ESN9 1337 aa11.82□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Mknk2Q8CDB0 459 aa11.81□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Uspl1Q3ULM6 1089 aa11.81□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Ythdc1E9Q5K9 736 aaKnown RBP11.81□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 KarsQ99MN1 595 aaKnown RBP11.81□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Nphp4P59240 1425 aa11.81□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Dmrtc1Q9D9R7 182 aa11.81□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Fndc1E9Q043 1732 aa11.8□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Fam135bQ9DAI6 1403 aa11.8□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Dhx16G3X8X0 1044 aaKnown RBP11.8□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Talpid3E9PV87 1520 aa11.8□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Spryd3E9Q9B3 442 aa11.8□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Cep152A2AUM9 1736 aaKnown RBP11.8□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Anp32bQ9EST5 272 aaKnown RBP11.79□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Zfp91Q62511 572 aa11.79□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Clcn1Q64347 994 aa11.79□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Ssh1Q76I79 1042 aa11.79□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Atxn3Q9CVD2 355 aa11.79□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 AnkarA2RT91 1465 aa11.78□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Terf2O35144 541 aa11.78□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Lemd3Q9WU40 921 aa11.78□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Cyb5rlB1AS42 316 aa11.78□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Cd109Q8R422 1442 aa11.78□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Tex2Q6ZPJ0 1128 aaKnown RBP11.78□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Gprasp1Q5U4C1 1347 aa11.77□□□□□ -0.52
Ccdc171-201ENSMUST00000053414 Fam163aQ8CAA5 168 aa11.77□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Trim30dE9PWL0 497 aa11.76□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Map4P27546 1125 aaKnown RBP11.76□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Ppp2r3aB2RXC8 1150 aa11.76□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Nom1Q3UFM5 854 aaKnown RBP11.76□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Abcc3B2RX12 1523 aa11.75□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Kidins220E9Q9B7 1793 aa11.75□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Kiaa0556Q8C753 1610 aa11.75□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Kif1bQ60575 1816 aaKnown RBP11.75□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 AU019823E9PUQ3 292 aa11.75□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Scaf1Q5U4C3 1256 aaKnown RBP11.75□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 E4f1Q8CCE9 783 aa11.75□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Pnma3Q8JZW8 466 aa11.75□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Usp54Q8BL06 1588 aaKnown RBP11.74□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Hsp90ab1P11499 724 aaKnown RBP11.74□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Myo3aQ8K3H5 1613 aa11.74□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Speer4f1Q9D5Q6 258 aa11.74□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Slc4a1apE9PX68 744 aa11.73□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Rsph4aQ8BYM7 716 aa11.73□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Abcc6Q9R1S7 1498 aa11.73□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Dnajc14Q921R4 703 aa11.73□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Adgrl3Q80TS3 1537 aa11.73□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 AI481877A2ALV5 1481 aa11.72□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Phlpp2Q8BXA7 1320 aa11.72□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Rabep1O35551 862 aa11.71□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 KdrP35918 1367 aa11.71□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Iqgap3F8VQ29 1632 aa11.71□□□□□ -0.53
Ccdc171-201ENSMUST00000053414 Tmf1B9EKI3 1091 aa11.71□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Dusp27Q148W8 1138 aa11.7□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Rrp7aQ9D1C9 280 aaKnown RBP11.7□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Dhx30Q99PU8 1217 aaKnown RBP11.7□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 4933402E13RikQ9D4D2 429 aa11.7□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Ifit1bl1D3Z6F0 470 aa11.7□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Knl1Q66JQ7 1612 aa11.69□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Fam184bQ0KK56 942 aa11.69□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Ggt6Q6PDE7 497 aa11.69□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 IbtkQ6ZPR6 1352 aaKnown RBP11.69□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Rbm25B2RY56 838 aaKnown RBP11.68□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Htatsf1Q8BGC0 757 aa11.68□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Abca8bQ8K440 1620 aa11.68□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Med14A2ABV5 1459 aaKnown RBP11.68□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Neurod2Q62414 383 aa11.68□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Scaf11E9PZM7 1456 aaKnown RBP11.68□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Rims1Q99NE5 1463 aa11.68□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Sall3Q62255 1320 aa11.67□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Fgd6Q69ZL1 1399 aa11.67□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Aplp1Q03157 653 aa11.67□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 ArxO35085 564 aa11.66□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Kank4Q6P9J5 1016 aa11.66□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Kif7B7ZNG0 1348 aa11.66□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Trim58Q5NCC9 485 aa11.65□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Usp32F8VPZ3 1604 aa11.65□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Fancd2Q80V62 1450 aa11.65□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 EngaseQ8BX80 734 aa11.65□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Abca6Q8K441 1624 aa11.65□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Igf1rQ60751 1373 aa11.65□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Cdc42bpgQ80UW5 1551 aa11.65□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 Tet3Q8BG87 1668 aa11.65□□□□□ -0.54
Ccdc171-201ENSMUST00000053414 MaddQ80U28 1577 aa11.64□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 NhsB1AV60 1647 aa11.64□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Efcab6Q6P1E8 1516 aa11.63□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Gm9992B2RWK3 458 aa11.63□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Unc93aQ710D3 458 aa11.63□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Jph4Q80WT0 628 aa11.63□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Ncapd2Q8K2Z4 1392 aa11.63□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Gys2Q8VCB3 704 aa11.63□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Ylpm1Q9R0I7 1386 aaKnown RBP11.62□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Map4k4P97820 1233 aaKnown RBP11.62□□□□□ -0.55
Ccdc171-201ENSMUST00000053414 Tmx3Q8BXZ1 456 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms