RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Abcc6Q9R1S7 1498 aa18.72■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Nsd2Q8BVE8 1365 aa18.72■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Prdm10Q3UTQ7 1184 aa18.72■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Cfap74Q3UY96 1578 aa18.71■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Gprasp1Q5U4C1 1347 aa18.71■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Prdm16A2A935 1275 aa18.71■□□□□ 0.59
Ushbp1-201ENSMUST00000049184 Sall3Q62255 1320 aa18.7■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Rrp12Q6P5B0 1295 aaKnown RBP18.7■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Cluap1Q8R3P7 413 aa18.7■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Trim26Q99PN3 545 aa18.7■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Plcb2A3KGF7 1181 aa18.7■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Kif2cQ922S8 721 aa18.7■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 AI481877A2ALV5 1481 aa18.69■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Ksr2Q3UVC0 959 aa18.69■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Taok2Q6ZQ29 1240 aa18.69■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Usp40Q8BWR4 1235 aa18.69■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Stard8Q8K031 1019 aa18.69■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Hecw1Q8K4P8 1604 aa18.68■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 GsdmaQ9EST1 446 aa18.68■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Neo1P97798 1493 aa18.67■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Isy1Q69ZQ2 285 aaKnown RBP18.67■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Rnf17Q99MV7 1640 aa18.67■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Map7O88735 730 aa18.66■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Rusc2Q80U22 1514 aa18.66■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Iqsec2Q5DU25 1478 aa18.65■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Ccar1Q8CH18 1146 aaKnown RBP18.64■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Trim44Q9QXA7 346 aa18.64■□□□□ 0.58
Ushbp1-201ENSMUST00000049184 Uggt2E9Q4X2 1504 aa18.64■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 IbtkQ6ZPR6 1352 aaKnown RBP18.63■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Srpk2O54781 681 aaKnown RBP18.63■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Cnga1P29974 684 aa18.63■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Ppp1r3fQ9JIG4 799 aa18.63■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Dnmt1P13864 1620 aaKnown RBP18.63■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Ddit3P35639 168 aa18.63■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Hs1bp3Q3TC93 395 aa18.63■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Fan1Q69ZT1 1020 aa18.62■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 P2rx7Q9Z1M0 595 aa18.62■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Map3k5O35099 1380 aa18.62■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 PogkQ80TC5 607 aa18.62■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Myom1Q62234 1667 aaKnown RBP18.61■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Abcc1O35379 1528 aa18.61■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 SlkO54988 1233 aa18.61■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Apaf1O88879 1249 aa18.61■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 AU019823E9PUQ3 292 aa18.6■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Kif18aQ91WD7 886 aa18.6■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Rsph3aQ3UFY4 516 aa18.6■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Nsfl1cQ9CZ44 370 aaKnown RBP18.6■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Pdcd11Q6NS46 1862 aaKnown RBP18.59■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Nphp4P59240 1425 aa18.59■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Usp54Q8BL06 1588 aaKnown RBP18.59■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 NgefQ8CHT1 710 aa18.59■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Cdc42bpbQ7TT50 1713 aa18.59■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Rfx1P48377 963 aa18.59■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Rbm25B2RY56 838 aaKnown RBP18.58■□□□□ 0.57
Ushbp1-201ENSMUST00000049184 Kif1bQ60575 1816 aaKnown RBP18.58■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 ShprhQ7TPQ3 1674 aa18.58■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Ddrgk1Q80WW9 315 aa18.58■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Abcc3B2RX12 1523 aa18.57■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 KdrP35918 1367 aa18.57■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Scaf11E9PZM7 1456 aaKnown RBP18.56■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Cog6Q8R3I3 657 aa18.56■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Talpid3E9PV87 1520 aa18.55■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Gm10093D3YYI8 482 aa18.55■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Cald1E9QA15 768 aaKnown RBP18.55■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Hdac1O09106 482 aaKnown RBP18.55■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 DekQ7TNV0 380 aaKnown RBP18.55■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 U2af1Q9D883 239 aaKnown RBP18.55■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Cep152A2AUM9 1736 aaKnown RBP18.55■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Stk24Q99KH8 431 aa18.54■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 KnstrnQ9D9Z1 312 aaKnown RBP18.54■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 SkilQ60665 675 aa18.54■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Clcn1Q64347 994 aa18.54■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Ncbp3Q8BZR9 615 aaKnown RBP18.53■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Tpm2P58774 284 aa18.53■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 ErbinQ80TH2 1402 aa18.53■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Tsen2Q6P7W5 460 aa18.52■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Myo3aQ8K3H5 1613 aa18.52■□□□□ 0.56
Ushbp1-201ENSMUST00000049184 Tex2Q6ZPJ0 1128 aaKnown RBP18.52■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Dusp27Q148W8 1138 aa18.51■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Maco1Q7TQE6 664 aaKnown RBP18.51■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Zfp777B9EKF4 885 aa18.5■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Brd1E9PZ26 1189 aaKnown RBP18.5■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Znf330Q922H9 316 aa18.5■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Adgrl3Q80TS3 1537 aa18.49■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Ncapd2Q8K2Z4 1392 aa18.49■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Zfyve16Q80U44 1528 aa18.49■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Hfm1D3Z4R1 1434 aa18.49■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 CastP51125 788 aa18.49■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Dhx16G3X8X0 1044 aaKnown RBP18.48■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Puf60Q3UEB3 564 aaKnown RBP18.48■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Znf608Q56A10 1511 aa18.48■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Ttc21bQ0HA38 1315 aa18.47■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Rangap1P46061 589 aaKnown RBP18.47■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Tfip11Q9ERA6 838 aaKnown RBP18.46■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Abca17E9PX95 1733 aa18.46■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Rims1Q99NE5 1463 aa18.46■□□□□ 0.55
Ushbp1-201ENSMUST00000049184 Kdm4cQ8VCD7 1054 aa18.45■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Kif3bQ61771 747 aa18.45■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Ccdc60Q8C4J0 545 aa18.45■□□□□ 0.54
Ushbp1-201ENSMUST00000049184 Aplp1Q03157 653 aa18.44■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms