RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Gas2l2Q5SSG4 860 aa11.25□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Ercc6l2Q9JIM3 1537 aa11.25□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Hfm1D3Z4R1 1434 aa11.25□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Sipa1l1Q8C0T5 1782 aa11.24□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Wdr43Q6ZQL4 677 aaKnown RBP11.24□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Kdm5aQ3UXZ9 1690 aa11.24□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Kif16bB1AVY7 1312 aa11.24□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 IqubQ8CDK3 788 aa11.24□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 CltcQ68FD5 1675 aaKnown RBP11.24□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 DnmbpQ6TXD4 1580 aa11.24□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Uggt1Q6P5E4 1551 aa11.23□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Znf316Q6PGE4 1016 aa11.23□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Senp3Q9EP97 568 aaKnown RBP11.23□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Anp32aO35381 247 aa11.22□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Utp14aQ640M1 767 aaKnown RBP11.22□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Exosc9Q9JHI7 438 aaKnown RBP11.22□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Plxnc1Q9QZC2 1574 aa11.22□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Kiaa1107Q80TK0 1369 aa11.22□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Kif13aQ9EQW7 1749 aa11.22□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 NpatQ8BMA5 1420 aa11.21□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 IghaA0A0A6YXW6 389 aa11.21□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Speer4f1Q9D5Q6 258 aa11.21□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Kank1E9Q238 1360 aa11.21□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Usp19Q3UJD6 1360 aa11.21□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Naip7Q9JIB3 1402 aa11.2□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Adamts7Q68SA9 1657 aa11.2□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Stard8Q8K031 1019 aa11.2□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Atp2b2Q9R0K7 1198 aa11.19□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Atxn3Q9CVD2 355 aa11.18□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 CenpjQ569L8 1344 aa11.18□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Slc52a2Q9D8F3 450 aa11.18□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Supt16hQ920B9 1047 aa11.17□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Itsn1Q9Z0R4 1714 aa11.17□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Arhgap23Q69ZH9 1483 aa11.17□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Pak3Q61036 559 aa11.16□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Cdk19Q8BWD8 501 aa11.16□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Scaf11E9PZM7 1456 aaKnown RBP11.16□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Arid4bA2CG63 1314 aaKnown RBP11.16□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Ift172Q6VH22 1749 aa11.16□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 InsrP15208 1372 aa11.16□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Apaf1O88879 1249 aa11.16□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Txndc2Q6P902 515 aa11.16□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 MaddQ80U28 1577 aa11.15□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Golga2Q921M4 999 aa11.15□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 NinlQ6ZQ12 1394 aa11.15□□□□□ -0.62
Ptchd1-201ENSMUST00000038665 Liat1Q810M6 228 aa11.15□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Ccdc30Q8BVF4 654 aa11.15□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Trim26Q99PN3 545 aa11.14□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Arhgef28P97433 1693 aa11.14□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Psme1P97371 249 aa11.14□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 IbtkQ6ZPR6 1352 aaKnown RBP11.14□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Abca14E9Q8F8 1683 aa11.14□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Rangap1P46061 589 aaKnown RBP11.13□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Gprasp1Q5U4C1 1347 aa11.12□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Atf7ipQ7TT18 1306 aa11.12□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Cald1E9QA15 768 aaKnown RBP11.12□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Polr3glQ8R0C0 218 aa11.12□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 U2af1Q9D883 239 aaKnown RBP11.12□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 GsdmaQ9EST1 446 aa11.11□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Safb2Q80YR5 991 aaKnown RBP11.11□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Gsto1O09131 240 aa11.11□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Uspl1Q3ULM6 1089 aa11.1□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Tsen2Q6P7W5 460 aa11.1□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Myt1Q8CFC2 1127 aa11.1□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 RictorQ6QI06 1708 aa11.09□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 Birc3O08863 600 aa11.09□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 HnrnpmQ9D0E1 729 aaKnown RBP11.09□□□□□ -0.63
Ptchd1-201ENSMUST00000038665 NgefQ8CHT1 710 aa11.08□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Dbr1Q923B1 550 aa11.08□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Nrxn1Q9CS84 1514 aa11.08□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 B4galnt3Q6L8S8 986 aa11.08□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Tspyl2Q7TQI8 677 aa11.08□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 NktrP30415 1453 aa11.08□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Map3k19E9Q3S4 1311 aa11.07□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Adgrl1Q80TR1 1466 aa11.07□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Plin1Q8CGN5 517 aa11.06□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Egfem1Q8C088 590 aa11.06□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Pank1Q8K4K6 548 aa11.06□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Pcdh10E9PXQ7 1057 aa11.05□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 NeflP08551 543 aa11.05□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Plekhh1Q80TI1 1356 aa11.05□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Adamtsl3G3UXC7 1706 aa11.05□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Sox12Q04890 314 aa11.05□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Rwdd1Q9CQK7 243 aa11.04□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Slc12a5Q91V14 1138 aa11.04□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Nwd1A6H603 1563 aa11.04□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Iqsec2Q5DU25 1478 aa11.03□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Mcm10Q0VBD2 885 aa11.03□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Ppp1r3fQ9JIG4 799 aa11.03□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Med14A2ABV5 1459 aaKnown RBP11.03□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Upf2A2AT37 1269 aaKnown RBP11.02□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 MyclP10166 368 aa11.02□□□□□ -0.64
Ptchd1-201ENSMUST00000038665 Dusp27Q148W8 1138 aa11.02□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Ksr2Q3UVC0 959 aa11.02□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Prkrip1Q9CWV6 186 aaKnown RBP11.02□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Armcx1Q9CX83 456 aa11.02□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 PalmQ9Z0P4 383 aa11.02□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 KdrP35918 1367 aa11.02□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Eif2ak4Q9QZ05 1648 aa11.02□□□□□ -0.65
Ptchd1-201ENSMUST00000038665 Map4k4P97820 1233 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 54.8 ms