RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ylpm1Q9R0I7 1386 aaKnown RBP17.18■□□□□ 0.34
Nup88-201ENSMUST00000035283 Gprasp1Q5U4C1 1347 aa17.18■□□□□ 0.34
Nup88-201ENSMUST00000035283 Map4k4P97820 1233 aaKnown RBP17.18■□□□□ 0.34
Nup88-201ENSMUST00000035283 Ppp1r3fQ9JIG4 799 aa17.18■□□□□ 0.34
Nup88-201ENSMUST00000035283 Myo3aQ8K3H5 1613 aa17.17■□□□□ 0.34
Nup88-201ENSMUST00000035283 Apaf1O88879 1249 aa17.16■□□□□ 0.34
Nup88-201ENSMUST00000035283 Ksr2Q3UVC0 959 aa17.16■□□□□ 0.34
Nup88-201ENSMUST00000035283 GsdmaQ9EST1 446 aa17.16■□□□□ 0.34
Nup88-201ENSMUST00000035283 Myom2Q14BI5 1463 aa17.16■□□□□ 0.34
Nup88-201ENSMUST00000035283 Ttc21bQ0HA38 1315 aa17.16■□□□□ 0.34
Nup88-201ENSMUST00000035283 Myom1Q62234 1667 aaKnown RBP17.16■□□□□ 0.34
Nup88-201ENSMUST00000035283 ErbinQ80TH2 1402 aa17.16■□□□□ 0.34
Nup88-201ENSMUST00000035283 Atp10dQ8K2X1 1416 aa17.15■□□□□ 0.34
Nup88-201ENSMUST00000035283 Cluap1Q8R3P7 413 aa17.14■□□□□ 0.34
Nup88-201ENSMUST00000035283 IbtkQ6ZPR6 1352 aaKnown RBP17.14■□□□□ 0.33
Nup88-201ENSMUST00000035283 Stard8Q8K031 1019 aa17.14■□□□□ 0.33
Nup88-201ENSMUST00000035283 NhsB1AV60 1647 aa17.14■□□□□ 0.33
Nup88-201ENSMUST00000035283 Nphp4P59240 1425 aa17.14■□□□□ 0.33
Nup88-201ENSMUST00000035283 Xrn1P97789 1719 aaKnown RBP17.13■□□□□ 0.33
Nup88-201ENSMUST00000035283 Kidins220E9Q9B7 1793 aa17.13■□□□□ 0.33
Nup88-201ENSMUST00000035283 Tbc1d32Q3URV1 1296 aa17.12■□□□□ 0.33
Nup88-201ENSMUST00000035283 Fam135bQ9DAI6 1403 aa17.12■□□□□ 0.33
Nup88-201ENSMUST00000035283 Abca17E9PX95 1733 aa17.12■□□□□ 0.33
Nup88-201ENSMUST00000035283 Puf60Q3UEB3 564 aaKnown RBP17.12■□□□□ 0.33
Nup88-201ENSMUST00000035283 Antxr1Q9CZ52 562 aa17.12■□□□□ 0.33
Nup88-201ENSMUST00000035283 Iqsec2Q5DU25 1478 aa17.11■□□□□ 0.33
Nup88-201ENSMUST00000035283 Rabep1O35551 862 aa17.11■□□□□ 0.33
Nup88-201ENSMUST00000035283 Znf608Q56A10 1511 aa17.11■□□□□ 0.33
Nup88-201ENSMUST00000035283 AatkQ80YE4 1365 aa17.11■□□□□ 0.33
Nup88-201ENSMUST00000035283 Cep152A2AUM9 1736 aaKnown RBP17.1■□□□□ 0.33
Nup88-201ENSMUST00000035283 Dnttip2Q8R2M2 758 aaKnown RBP17.09■□□□□ 0.33
Nup88-201ENSMUST00000035283 Scaf11E9PZM7 1456 aaKnown RBP17.09■□□□□ 0.33
Nup88-201ENSMUST00000035283 Talpid3E9PV87 1520 aa17.09■□□□□ 0.33
Nup88-201ENSMUST00000035283 Abca8bQ8K440 1620 aa17.09■□□□□ 0.33
Nup88-201ENSMUST00000035283 Mfap1aC0HKD8 439 aaKnown RBP17.08■□□□□ 0.33
Nup88-201ENSMUST00000035283 Mfap1bC0HKD9 439 aaKnown RBP17.08■□□□□ 0.33
Nup88-201ENSMUST00000035283 Cald1E9QA15 768 aaKnown RBP17.08■□□□□ 0.33
Nup88-201ENSMUST00000035283 U2af1Q9D883 239 aaKnown RBP17.08■□□□□ 0.33
Nup88-201ENSMUST00000035283 Rangap1P46061 589 aaKnown RBP17.08■□□□□ 0.32
Nup88-201ENSMUST00000035283 Rims1Q99NE5 1463 aa17.07■□□□□ 0.32
Nup88-201ENSMUST00000035283 AU015836B2RUM3 263 aa17.07■□□□□ 0.32
Nup88-201ENSMUST00000035283 Pdcl3Q8BVF2 240 aa17.07■□□□□ 0.32
Nup88-201ENSMUST00000035283 Myo5cE9Q1F5 1742 aa17.07■□□□□ 0.32
Nup88-201ENSMUST00000035283 Cdk5rap2Q8K389 1822 aa17.06■□□□□ 0.32
Nup88-201ENSMUST00000035283 Catsper2A2ARP9 588 aa17.06■□□□□ 0.32
Nup88-201ENSMUST00000035283 Stag3O70576 1240 aa17.06■□□□□ 0.32
Nup88-201ENSMUST00000035283 Kiaa1210E9Q0C6 1637 aa17.06■□□□□ 0.32
Nup88-201ENSMUST00000035283 AU019823E9PUQ3 292 aa17.06■□□□□ 0.32
Nup88-201ENSMUST00000035283 Tsen2Q6P7W5 460 aa17.06■□□□□ 0.32
Nup88-201ENSMUST00000035283 Ccar1Q8CH18 1146 aaKnown RBP17.05■□□□□ 0.32
Nup88-201ENSMUST00000035283 Kif2cQ922S8 721 aa17.05■□□□□ 0.32
Nup88-201ENSMUST00000035283 Abca6Q8K441 1624 aa17.04■□□□□ 0.32
Nup88-201ENSMUST00000035283 Atl3Q91YH5 541 aa17.04■□□□□ 0.32
Nup88-201ENSMUST00000035283 Iqgap3F8VQ29 1632 aa17.04■□□□□ 0.32
Nup88-201ENSMUST00000035283 AampJ3QN89 436 aa17.04■□□□□ 0.32
Nup88-201ENSMUST00000035283 Phlpp2Q8BXA7 1320 aa17.03■□□□□ 0.32
Nup88-201ENSMUST00000035283 Dusp27Q148W8 1138 aa17.03■□□□□ 0.32
Nup88-201ENSMUST00000035283 Znf330Q922H9 316 aa17.03■□□□□ 0.32
Nup88-201ENSMUST00000035283 Pknox2Q8BG99 474 aa17.02■□□□□ 0.32
Nup88-201ENSMUST00000035283 KdrP35918 1367 aa17.02■□□□□ 0.31
Nup88-201ENSMUST00000035283 Nos1Q9Z0J4 1429 aa17.01■□□□□ 0.31
Nup88-201ENSMUST00000035283 Fndc1E9Q043 1732 aa17.01■□□□□ 0.31
Nup88-201ENSMUST00000035283 Tmem131lQ3U3D7 1597 aa17.01■□□□□ 0.31
Nup88-201ENSMUST00000035283 Abca8aQ8K442 1620 aa17■□□□□ 0.31
Nup88-201ENSMUST00000035283 Terf2O35144 541 aa17■□□□□ 0.31
Nup88-201ENSMUST00000035283 DnmbpQ6TXD4 1580 aa17■□□□□ 0.31
Nup88-201ENSMUST00000035283 Efcab6Q6P1E8 1516 aa17■□□□□ 0.31
Nup88-201ENSMUST00000035283 Mcm4P49717 862 aa16.99■□□□□ 0.31
Nup88-201ENSMUST00000035283 Ssh1Q76I79 1042 aa16.99■□□□□ 0.31
Nup88-201ENSMUST00000035283 Zranb1Q7M760 708 aa16.99■□□□□ 0.31
Nup88-201ENSMUST00000035283 AU022751B1B0V2 589 aa16.98■□□□□ 0.31
Nup88-201ENSMUST00000035283 Il4rP16382 810 aa16.98■□□□□ 0.31
Nup88-201ENSMUST00000035283 Ecm2Q5FW85 670 aa16.98■□□□□ 0.31
Nup88-201ENSMUST00000035283 Znf692Q3U381 531 aa16.97■□□□□ 0.31
Nup88-201ENSMUST00000035283 Maco1Q7TQE6 664 aaKnown RBP16.97■□□□□ 0.31
Nup88-201ENSMUST00000035283 Kif18aQ91WD7 886 aa16.97■□□□□ 0.31
Nup88-201ENSMUST00000035283 Gtf2a1Q99PM3 378 aa16.96■□□□□ 0.31
Nup88-201ENSMUST00000035283 Nsfl1cQ9CZ44 370 aaKnown RBP16.96■□□□□ 0.31
Nup88-201ENSMUST00000035283 Phf14Q9D4H9 881 aa16.96■□□□□ 0.31
Nup88-201ENSMUST00000035283 Lemd3Q9WU40 921 aa16.96■□□□□ 0.31
Nup88-201ENSMUST00000035283 InsrP15208 1372 aa16.96■□□□□ 0.31
Nup88-201ENSMUST00000035283 Aplp1Q03157 653 aa16.96■□□□□ 0.31
Nup88-201ENSMUST00000035283 Nutm1Q8BHP2 1126 aa16.96■□□□□ 0.31
Nup88-201ENSMUST00000035283 Zfyve16Q80U44 1528 aa16.96■□□□□ 0.31
Nup88-201ENSMUST00000035283 Adgrb3Q80ZF8 1522 aa16.96■□□□□ 0.31
Nup88-201ENSMUST00000035283 Cog6Q8R3I3 657 aa16.95■□□□□ 0.3
Nup88-201ENSMUST00000035283 Uggt1Q6P5E4 1551 aa16.95■□□□□ 0.3
Nup88-201ENSMUST00000035283 CastP51125 788 aa16.95■□□□□ 0.3
Nup88-201ENSMUST00000035283 Chd1P40201 1711 aa16.94■□□□□ 0.3
Nup88-201ENSMUST00000035283 Ccdc60Q8C4J0 545 aa16.94■□□□□ 0.3
Nup88-201ENSMUST00000035283 Znf518aB2RRF6 1478 aaKnown RBP16.93■□□□□ 0.3
Nup88-201ENSMUST00000035283 Arid3cA6PWV5 409 aa16.93■□□□□ 0.3
Nup88-201ENSMUST00000035283 Adgrl3Q80TS3 1537 aa16.93■□□□□ 0.3
Nup88-201ENSMUST00000035283 Adgrl1Q80TR1 1466 aa16.93■□□□□ 0.3
Nup88-201ENSMUST00000035283 Hfm1D3Z4R1 1434 aa16.93■□□□□ 0.3
Nup88-201ENSMUST00000035283 Sipa1l1Q8C0T5 1782 aa16.93■□□□□ 0.3
Nup88-201ENSMUST00000035283 Map7O88735 730 aa16.93■□□□□ 0.3
Nup88-201ENSMUST00000035283 Rfx1P48377 963 aa16.93■□□□□ 0.3
Nup88-201ENSMUST00000035283 4933402E13RikQ9D4D2 429 aa16.93■□□□□ 0.3
Nup88-201ENSMUST00000035283 Plcb2A3KGF7 1181 aa16.92■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms