RNA–Protein interactions for RNA: ENSMUST00000004949.7

Traf6-201, Transcript of TNF receptor-associated factor 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf6, Length 6,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6-201ENSMUST00000004949 Klf15Q9EPW2 415 aa16.19■□□□□ 0.18
Traf6-201ENSMUST00000004949 Ak7Q9D2H2 614 aa16.19■□□□□ 0.18
Traf6-201ENSMUST00000004949 Gm21680A0A0G2JGR8 267 aa16.19■□□□□ 0.18
Traf6-201ENSMUST00000004949 Rbm5Q91YE7 815 aaKnown RBP16.19■□□□□ 0.18
Traf6-201ENSMUST00000004949 Acsbg1Q99PU5 721 aa16.19■□□□□ 0.18
Traf6-201ENSMUST00000004949 GnpatP98192 678 aa16.18■□□□□ 0.18
Traf6-201ENSMUST00000004949 Stk3Q9JI10 497 aa16.18■□□□□ 0.18
Traf6-201ENSMUST00000004949 Tpm3-rs7D3Z2H9 248 aa16.18■□□□□ 0.18
Traf6-201ENSMUST00000004949 KarsQ99MN1 595 aaKnown RBP16.18■□□□□ 0.18
Traf6-201ENSMUST00000004949 Dusp27Q148W8 1138 aa16.18■□□□□ 0.18
Traf6-201ENSMUST00000004949 FosbP13346 338 aa16.18■□□□□ 0.18
Traf6-201ENSMUST00000004949 TefQ9JLC6 301 aa16.17■□□□□ 0.18
Traf6-201ENSMUST00000004949 Gm21663A0A0G2JE01 267 aa16.17■□□□□ 0.18
Traf6-201ENSMUST00000004949 Gm7361D3Z6R1 267 aa16.17■□□□□ 0.18
Traf6-201ENSMUST00000004949 5031410I06RikE9Q4E0 267 aa16.17■□□□□ 0.18
Traf6-201ENSMUST00000004949 Gm1979E9QAN3 267 aa16.17■□□□□ 0.18
Traf6-201ENSMUST00000004949 Gm5862K7N5V5 267 aa16.17■□□□□ 0.18
Traf6-201ENSMUST00000004949 Gm10220K7N660 267 aa16.17■□□□□ 0.18
Traf6-201ENSMUST00000004949 NexnQ7TPW1 607 aa16.17■□□□□ 0.18
Traf6-201ENSMUST00000004949 Fam50bQ9WTJ8 334 aa16.17■□□□□ 0.18
Traf6-201ENSMUST00000004949 Q3UJC8 639 aa16.16■□□□□ 0.18
Traf6-201ENSMUST00000004949 Gimap6Q8K349 305 aa16.15■□□□□ 0.18
Traf6-201ENSMUST00000004949 Filip1lQ6P6L0 1131 aa16.15■□□□□ 0.18
Traf6-201ENSMUST00000004949 CrcpO35427 148 aa16.15■□□□□ 0.18
Traf6-201ENSMUST00000004949 Atp6v1dP57746 247 aa16.15■□□□□ 0.18
Traf6-201ENSMUST00000004949 Gm10563F6WIE4 79 aa16.14■□□□□ 0.17
Traf6-201ENSMUST00000004949 Tpd52l1O54818 204 aa16.14■□□□□ 0.17
Traf6-201ENSMUST00000004949 BccipQ9CWI3 316 aa16.14■□□□□ 0.17
Traf6-201ENSMUST00000004949 Ccdc47Q9D024 483 aaKnown RBP16.14■□□□□ 0.17
Traf6-201ENSMUST00000004949 OvosQ3UU35 1456 aa16.14■□□□□ 0.17
Traf6-201ENSMUST00000004949 Washc2Q6PGL7 1334 aa16.14■□□□□ 0.17
Traf6-201ENSMUST00000004949 PrxO55103 1391 aa16.14■□□□□ 0.17
Traf6-201ENSMUST00000004949 Stk11ipQ3TAA7 1072 aa16.13■□□□□ 0.17
Traf6-201ENSMUST00000004949 SlkO54988 1233 aa16.13■□□□□ 0.17
Traf6-201ENSMUST00000004949 Gm156Q58A37 223 aa16.13■□□□□ 0.17
Traf6-201ENSMUST00000004949 Gm973E9Q295 1059 aa16.13■□□□□ 0.17
Traf6-201ENSMUST00000004949 Plekhh1Q80TI1 1356 aa16.12■□□□□ 0.17
Traf6-201ENSMUST00000004949 Slx4Q6P1D7 1565 aa16.12■□□□□ 0.17
Traf6-201ENSMUST00000004949 Ddx11Q6AXC6 880 aa16.12■□□□□ 0.17
Traf6-201ENSMUST00000004949 Map3k13Q1HKZ5 959 aa16.12■□□□□ 0.17
Traf6-201ENSMUST00000004949 Znf710Q3U288 666 aa16.12■□□□□ 0.17
Traf6-201ENSMUST00000004949 Slc52a2Q9D8F3 450 aa16.12■□□□□ 0.17
Traf6-201ENSMUST00000004949 Nek4Q9Z1J2 792 aa16.12■□□□□ 0.17
Traf6-201ENSMUST00000004949 Gpatch8A2A6A1 1505 aa16.11■□□□□ 0.17
Traf6-201ENSMUST00000004949 Noc3lQ8VI84 807 aaKnown RBP16.11■□□□□ 0.17
Traf6-201ENSMUST00000004949 Ankrd26Q811D2 1581 aa16.11■□□□□ 0.17
Traf6-201ENSMUST00000004949 Isy1Q69ZQ2 285 aaKnown RBP16.11■□□□□ 0.17
Traf6-201ENSMUST00000004949 Abl1P00520 1123 aa16.1■□□□□ 0.17
Traf6-201ENSMUST00000004949 Ccp110Q7TSH4 1004 aa16.1■□□□□ 0.17
Traf6-201ENSMUST00000004949 Dmrt2Q8BG36 561 aa16.1■□□□□ 0.17
Traf6-201ENSMUST00000004949 TkfcQ8VC30 578 aa16.1■□□□□ 0.17
Traf6-201ENSMUST00000004949 St18Q80TY4 1045 aa16.1■□□□□ 0.17
Traf6-201ENSMUST00000004949 Cyp46a1Q9WVK8 500 aa16.09■□□□□ 0.17
Traf6-201ENSMUST00000004949 Kcnh8P59111 1102 aa16.09■□□□□ 0.17
Traf6-201ENSMUST00000004949 Gnl3lQ6PGG6 577 aaKnown RBP16.09■□□□□ 0.17
Traf6-201ENSMUST00000004949 Ncoa3O09000 1398 aa16.09■□□□□ 0.17
Traf6-201ENSMUST00000004949 Thoc2B1AZI6 1594 aaKnown RBP16.09■□□□□ 0.17
Traf6-201ENSMUST00000004949 Exoc6bA6H5Z3 810 aa16.09■□□□□ 0.17
Traf6-201ENSMUST00000004949 Zranb1Q7M760 708 aa16.09■□□□□ 0.17
Traf6-201ENSMUST00000004949 Ythdc2B2RR83 1445 aaKnown RBP16.09■□□□□ 0.17
Traf6-201ENSMUST00000004949 Krt82Q99M74 516 aa16.08■□□□□ 0.17
Traf6-201ENSMUST00000004949 Rsph3aQ3UFY4 516 aa16.08■□□□□ 0.16
Traf6-201ENSMUST00000004949 Nol12Q8BG17 217 aa16.08■□□□□ 0.16
Traf6-201ENSMUST00000004949 Caskin1Q6P9K8 1431 aa16.08■□□□□ 0.16
Traf6-201ENSMUST00000004949 Cald1E9QA15 768 aaKnown RBP16.08■□□□□ 0.16
Traf6-201ENSMUST00000004949 Plekhg5Q66T02 1073 aa16.08■□□□□ 0.16
Traf6-201ENSMUST00000004949 Erc2Q6PH08 957 aa16.07■□□□□ 0.16
Traf6-201ENSMUST00000004949 Cdc37l1Q9CZP7 335 aa16.07■□□□□ 0.16
Traf6-201ENSMUST00000004949 Fbln2P37889 1221 aa16.07■□□□□ 0.16
Traf6-201ENSMUST00000004949 TmpoQ61033 693 aaKnown RBP16.07■□□□□ 0.16
Traf6-201ENSMUST00000004949 Gm21969J3QJZ1 289 aa16.07■□□□□ 0.16
Traf6-201ENSMUST00000004949 Ccdc171E9Q1U1 1324 aa16.07■□□□□ 0.16
Traf6-201ENSMUST00000004949 Casq1O09165 405 aa16.06■□□□□ 0.16
Traf6-201ENSMUST00000004949 Btbd11Q6GQW0 1109 aa16.06■□□□□ 0.16
Traf6-201ENSMUST00000004949 Mapkbp1Q6NS57 1503 aa16.06■□□□□ 0.16
Traf6-201ENSMUST00000004949 Polr3gQ6NXY9 223 aa16.06■□□□□ 0.16
Traf6-201ENSMUST00000004949 WizO88286 1684 aaKnown RBP16.06■□□□□ 0.16
Traf6-201ENSMUST00000004949 ApobrQ8VBT6 942 aa16.06■□□□□ 0.16
Traf6-201ENSMUST00000004949 Nol8Q3UHX0 1147 aaKnown RBP16.05■□□□□ 0.16
Traf6-201ENSMUST00000004949 Mlh3A0A1Y7VMP7 1443 aa16.05■□□□□ 0.16
Traf6-201ENSMUST00000004949 Plekhd1B2RPU2 505 aa16.05■□□□□ 0.16
Traf6-201ENSMUST00000004949 Ttc19Q8CC21 365 aa16.05■□□□□ 0.16
Traf6-201ENSMUST00000004949 Sf3a1Q8K4Z5 791 aaKnown RBP16.05■□□□□ 0.16
Traf6-201ENSMUST00000004949 Nap1l3Q794H2 544 aa16.05■□□□□ 0.16
Traf6-201ENSMUST00000004949 Cwc27Q3TKY6 469 aa16.04■□□□□ 0.16
Traf6-201ENSMUST00000004949 Gpatch11Q3UFS4 262 aa16.04■□□□□ 0.16
Traf6-201ENSMUST00000004949 Wdr78E9PYY5 807 aa16.04■□□□□ 0.16
Traf6-201ENSMUST00000004949 Rnf20Q5DTM8 973 aa16.04■□□□□ 0.16
Traf6-201ENSMUST00000004949 PsapQ61207 557 aaKnown RBP16.04■□□□□ 0.16
Traf6-201ENSMUST00000004949 PxdnQ3UQ28 1475 aa16.03■□□□□ 0.16
Traf6-201ENSMUST00000004949 Bicdl1A0JNT9 577 aa16.03■□□□□ 0.16
Traf6-201ENSMUST00000004949 Ccne1Q61457 408 aa16.03■□□□□ 0.16
Traf6-201ENSMUST00000004949 Atxn3Q9CVD2 355 aa16.03■□□□□ 0.16
Traf6-201ENSMUST00000004949 Eif4g1Q6NZJ6 1600 aaKnown RBP16.03■□□□□ 0.16
Traf6-201ENSMUST00000004949 AI481877A2ALV5 1481 aa16.03■□□□□ 0.16
Traf6-201ENSMUST00000004949 BC005561E9Q5E2 1589 aa16.03■□□□□ 0.16
Traf6-201ENSMUST00000004949 Gnai2P08752 355 aaKnown RBP16.03■□□□□ 0.16
Traf6-201ENSMUST00000004949 Kri1Q8VDQ9 704 aaKnown RBP16.03■□□□□ 0.16
Traf6-201ENSMUST00000004949 Cplx2P84086 134 aa16.02■□□□□ 0.16
Traf6-201ENSMUST00000004949 4930572O03RikQ8C5Y0 211 aa16.02■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms