RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ccdc183A2AJB1 534 aa10.98□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Cavin1O54724 392 aa10.98□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Phactr2B1AVP0 632 aa10.97□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Me1P06801 572 aa10.97□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Gps2Q921N8 327 aa10.97□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Prl7d1P04769 244 aa10.97□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Def6Q8C2K1 630 aa10.97□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Shq1Q7TMX5 569 aa10.97□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Zkscan1Q8BGS3 561 aaKnown RBP10.97□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Cyp46a1Q9WVK8 500 aa10.97□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Phf14Q9D4H9 881 aa10.96□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Fam184aE9PW83 1143 aa10.96□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Mical1Q8VDP3 1048 aa10.96□□□□□ -0.65
Ccdc47-201ENSMUST00000002043 Rhot2Q8JZN7 620 aa10.96□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Eif2s2Q99L45 331 aaKnown RBP10.96□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Usp16Q99LG0 825 aa10.96□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Hmgb2P30681 210 aaKnown RBP10.95□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Dnaaf4Q8R368 420 aa10.95□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Map9Q3TRR0 646 aa10.95□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Cux1P53564 1515 aa10.94□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Esx1O88933 382 aa10.94□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Eif3aP23116 1344 aaKnown RBP10.94□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Cavin4A2AMM0 362 aa10.94□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Fyb1O35601 819 aa10.94□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Kif20aP97329 887 aa10.94□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Sv2bQ8BG39 683 aa10.94□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Lrrc45Q8CIM1 670 aa10.94□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Gm21190A0A0G2JGJ6 266 aa10.94□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Ppp2r3aB2RXC8 1150 aa10.94□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Cfdp1O88271 295 aaKnown RBP10.94□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Pnmal2G3X9N3 661 aa10.93□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Stim1P70302 685 aa10.93□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Cep112Q5PR68 954 aa10.93□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Polr3gQ6NXY9 223 aa10.93□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Rbm28Q8CGC6 750 aaKnown RBP10.93□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 HypkQ9CR41 129 aa10.93□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Rbm25B2RY56 838 aaKnown RBP10.92□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Q9D9S1 216 aa10.92□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Atad2bE9Q166 1460 aaKnown RBP10.91□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Taok2Q6ZQ29 1240 aa10.91□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Hnrnpul1Q8VDM6 859 aaKnown RBP10.91□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Ccdc96Q9CR92 584 aa10.91□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Neurod6P48986 337 aa10.91□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Nek4Q9Z1J2 792 aa10.91□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Mad1l1Q9WTX8 717 aaKnown RBP10.9□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Nap1l1P28656 391 aaKnown RBP10.9□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Jph4Q80WT0 628 aa10.9□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 PogkQ80TC5 607 aa10.9□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 SrrtQ99MR6 875 aaKnown RBP10.9□□□□□ -0.66
Ccdc47-201ENSMUST00000002043 Tango6Q8C3S2 1079 aa10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Cfap45Q9D9U9 551 aa10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Vps8Q0P5W1 1427 aa10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Mink1Q9JM52 1308 aa10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Rapgef2Q8CHG7 1496 aa10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Cdkl5Q3UTQ8 938 aa10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Lrrfip1Q3UZ39 729 aaKnown RBP10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Sycp1Q62209 993 aa10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 TatQ8QZR1 454 aa10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Stk38Q91VJ4 465 aa10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Stard3nlQ9DCI3 235 aa10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Ehmt1Q5DW34 1296 aa10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Pknox2Q8BG99 474 aa10.89□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Hmox1P14901 289 aa10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 MlecQ6ZQI3 291 aaKnown RBP10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 KarsQ99MN1 595 aaKnown RBP10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 SelenooQ9DBC0 667 aa10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Ncbp1Q3UYV9 790 aaKnown RBP10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Cc2d1aQ8K1A6 943 aa10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Rab3gap2Q8BMG7 1366 aa10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Cc2d2bA0A286YDU8 1405 aa10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Ttll13A4Q9F6 804 aa10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Arid4aF8VPQ2 1261 aaKnown RBP10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Gnai2P08752 355 aaKnown RBP10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Lmbr1Q9JIT0 490 aa10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Ttll5Q8CHB8 1328 aa10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Commd10Q8JZY2 202 aa10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 CenpqQ9CPQ5 267 aa10.88□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Polr1aO35134 1717 aaKnown RBP10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Eva1cP58659 440 aa10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Fchsd2Q3USJ8 740 aa10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Fam193aQ8CGI1 1231 aaKnown RBP10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Bag1Q60739 355 aa10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Cep57l1Q8VDS7 400 aa10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Med4Q9CQA5 270 aa10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 TefQ9JLC6 301 aa10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Sycp2Q9CUU3 1500 aa10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Cep131Q62036 1060 aa10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 TxlnaQ6PAM1 554 aaKnown RBP10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Gtf2a1Q99PM3 378 aa10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Cyp26c1B2RXA7 518 aa10.87□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Agtpbp1Q641K1 1218 aa10.86□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Ppp6r1Q7TSI3 856 aa10.86□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Gimap6Q8K349 305 aa10.86□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Nphp1Q9QY53 687 aa10.86□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Krt85Q9Z2T6 507 aa10.86□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Puf60Q3UEB3 564 aaKnown RBP10.86□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Usp48Q3V0C5 1052 aa10.86□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Wasf1Q8R5H6 559 aa10.86□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Hs1bp3Q3TC93 395 aa10.86□□□□□ -0.67
Ccdc47-201ENSMUST00000002043 Ipo4Q8VI75 1082 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms