RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 AI481877A2ALV5 1481 aa11.81□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Kif14L0N7N1 1674 aaKnown RBP11.81□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Triml2E9PW10 424 aa11.8□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Sptbn5F6UCX4 1208 aa11.8□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Usp16Q99LG0 825 aa11.8□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Swt1Q9DBQ9 907 aa11.8□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Duxf3A0A0N4SV92 674 aa11.8□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Atp10dQ8K2X1 1416 aa11.8□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Cavin4A2AMM0 362 aa11.79□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Maco1Q7TQE6 664 aaKnown RBP11.79□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Mapkbp1Q6NS57 1503 aa11.79□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Rtf1A2AQ19 715 aaKnown RBP11.79□□□□□ -0.52
Col6a1-201ENSMUST00000001147 SkilQ60665 675 aa11.79□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Ppp1r9bQ6R891 817 aaKnown RBP11.79□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Kif18aQ91WD7 886 aa11.79□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Nek4Q9Z1J2 792 aa11.79□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Map3k4O08648 1597 aa11.79□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Lrrc9Q8CDN9 1456 aa11.78□□□□□ -0.52
Col6a1-201ENSMUST00000001147 MyclP10166 368 aa11.78□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Map4k4P97820 1233 aaKnown RBP11.78□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Kdm2bQ6P1G2 1309 aa11.78□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Rsph3aQ3UFY4 516 aa11.78□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Chmp4cQ9D7F7 232 aa11.78□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Eif4g2Q62448 906 aaKnown RBP11.78□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Tnnt2P50752 301 aa11.77□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Q3TQI7 289 aaKnown RBP11.77□□□□□ -0.52
Col6a1-201ENSMUST00000001147 Ric3Q8BPM6 367 aa11.76□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Stk31Q99MW1 1018 aa11.76□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Mbd5B1AYB6 1498 aa11.75□□□□□ -0.53
Col6a1-201ENSMUST00000001147 PalmQ9Z0P4 383 aa11.75□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Atf7ipQ7TT18 1306 aa11.75□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Setbp1Q9Z180 1582 aa11.75□□□□□ -0.53
Col6a1-201ENSMUST00000001147 AampJ3QN89 436 aa11.75□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Cdk19Q8BWD8 501 aa11.75□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Supt6hQ62383 1726 aaKnown RBP11.75□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Adgrl2Q8JZZ7 1487 aa11.74□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Rlbp1Q9Z275 317 aa11.74□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Ssh1Q76I79 1042 aa11.74□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Abca16E9PWJ7 1678 aa11.74□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Kiaa1551Q5DTW7 1521 aa11.73□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Tfip11Q9ERA6 838 aaKnown RBP11.73□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Gnai1B2RSH2 354 aa11.73□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Aplp1Q03157 653 aa11.73□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Gnai3Q9DC51 354 aa11.73□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Cabp2Q9JLK4 216 aa11.73□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Rrp12Q6P5B0 1295 aaKnown RBP11.72□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Ciz1Q8VEH2 845 aa11.72□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Casq1O09165 405 aa11.71□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Tex14Q7M6U3 1450 aa11.71□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Gm16486A0A1D5RMD1 1434 aa11.71□□□□□ -0.53
Col6a1-201ENSMUST00000001147 Ppp1r3fQ9JIG4 799 aa11.71□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Ccdc171E9Q1U1 1324 aa11.71□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Slc12a5Q91V14 1138 aa11.71□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Q9D2X8 372 aa11.71□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Lamc1P02468 1607 aaKnown RBP11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Abcc6Q9R1S7 1498 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 MpripP97434 1024 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Cgnl1Q6AW69 1298 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Edc4Q3UJB9 1406 aaKnown RBP11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Sbno1Q689Z5 1390 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 MccE9PWI3 1003 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Casc1Q6TDU8 730 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Cabp4Q8VHC5 271 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 TnikP83510 1323 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Pnmal2G3X9N3 661 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Pcmtd1P59913 357 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Afap1Q80YS6 731 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Cdc37l1Q9CZP7 335 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Tarbp1E9Q368 1579 aa11.7□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Znf692Q3U381 531 aa11.69□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Fmn2Q9JL04 1578 aa11.69□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Dot1lQ6XZL8 1540 aa11.69□□□□□ -0.54
Col6a1-201ENSMUST00000001147 CastP51125 788 aa11.69□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Cetn4Q8K4K1 168 aa11.69□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Pabpn1Q8CCS6 302 aaKnown RBP11.68□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Igf1rQ60751 1373 aa11.68□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Plekhm2Q80TQ5 1018 aa11.68□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Rrp9Q91WM3 475 aaKnown RBP11.68□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Slc52a2Q9D8F3 450 aa11.68□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Gtf2a1Q99PM3 378 aa11.68□□□□□ -0.54
Col6a1-201ENSMUST00000001147 4933402E13RikQ9D4D2 429 aa11.68□□□□□ -0.54
Col6a1-201ENSMUST00000001147 AU019823E9PUQ3 292 aa11.67□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Mcm10Q0VBD2 885 aa11.67□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Q3UPC7 1272 aa11.67□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Phactr2B1AVP0 632 aa11.67□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Abcc2Q8VI47 1543 aa11.67□□□□□ -0.54
Col6a1-201ENSMUST00000001147 FanciQ8K368 1330 aa11.67□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Catsper2A2ARP9 588 aa11.66□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Kdm5cP41230 1554 aa11.66□□□□□ -0.54
Col6a1-201ENSMUST00000001147 CarsQ9ER72 831 aaKnown RBP11.65□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Mcm4P49717 862 aa11.65□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Tbc1d32Q3URV1 1296 aa11.65□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Ggnbp2Q5SV77 696 aa11.65□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Usp19Q3UJD6 1360 aa11.65□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Phlpp2Q8BXA7 1320 aa11.65□□□□□ -0.54
Col6a1-201ENSMUST00000001147 Slc4a10Q5DTL9 1118 aa11.65□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Nol12Q8BG17 217 aa11.65□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Cdc42bpaQ3UU96 1719 aa11.64□□□□□ -0.55
Col6a1-201ENSMUST00000001147 MvpQ9EQK5 861 aa11.64□□□□□ -0.55
Col6a1-201ENSMUST00000001147 Brpf1B2RRD7 1212 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms