RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 SUS1Q6WNK7 96 aa-2.63□□□□□ -2.83
snR54snR54 YIL156W-BQ2V2P4 73 aa-2.66□□□□□ -2.84
snR54snR54 RPS27AP35997 82 aaKnown RBP-2.67□□□□□ -2.84
snR54snR54 SCP1Q08873 200 aa-2.67□□□□□ -2.84
snR54snR54 SWR1Q05471 1514 aa-2.72□□□□□ -2.84
snR54snR54 APC1P53886 1748 aa-2.72□□□□□ -2.84
snR54snR54 TOS6P48560 102 aa-2.73□□□□□ -2.85
snR54snR54 SIP18P50263 79 aa-2.73□□□□□ -2.85
snR54snR54 YHR050W-AQ05451 56 aa-2.73□□□□□ -2.85
snR54snR54 MDS3P53094 1487 aa-2.76□□□□□ -2.85
snR54snR54 IRC20Q06554 1556 aa-2.76□□□□□ -2.85
snR54snR54 SMC4Q12267 1418 aa-2.76□□□□□ -2.85
snR54snR54 POC4Q12245 148 aaPredicted RBP-2.78□□□□□ -2.85
snR54snR54 PDR10P51533 1564 aa-2.83□□□□□ -2.86
snR54snR54 YDL022C-AP0C5L6 82 aa-2.83□□□□□ -2.86
snR54snR54 OLI1P61829 76 aa-2.83□□□□□ -2.86
snR54snR54 YOR343CQ12484 108 aa-2.83□□□□□ -2.86
snR54snR54 DYN1P36022 4092 aa-2.83□□□□□ -2.86
snR54snR54 LSM2P38203 95 aaKnown RBP-2.88□□□□□ -2.87
snR54snR54 GCN1P33892 2672 aaKnown RBP-2.89□□□□□ -2.87
snR54snR54 YOR105WQ08504 108 aa-2.89□□□□□ -2.87
snR54snR54 YMR175W-AQ3E766 64 aa-2.91□□□□□ -2.88
snR54snR54 MDN1Q12019 4910 aaKnown RBP-2.92□□□□□ -2.88
snR54snR54 YOR394C-AQ8TGJ0 55 aa-2.93□□□□□ -2.88
snR54snR54 RPO21P04050 1733 aaKnown RBP-2.94□□□□□ -2.88
snR54snR54 YBR200W-AQ3E755 54 aa-2.95□□□□□ -2.88
snR54snR54 YMR082CQ04276 118 aa-2.96□□□□□ -2.88
snR54snR54 YLR146W-AQ2V2P1 62 aa-2.96□□□□□ -2.88
snR54snR54 KOG1P38873 1557 aa-2.96□□□□□ -2.88
snR54snR54 SIN3P22579 1536 aa-2.97□□□□□ -2.88
snR54snR54 TY3B-GQ99315 1547 aa-2.99□□□□□ -2.89
snR54snR54 YCL001W-BQ96VH2 84 aa-3□□□□□ -2.89
snR54snR54 YKL065W-AQ2V2P2 73 aa-3.03□□□□□ -2.89
snR54snR54 ATP17Q06405 101 aa-3.04□□□□□ -2.9
snR54snR54 YOR314WQ12506 109 aa-3.06□□□□□ -2.9
snR54snR54 YOR011W-AQ3E807 68 aa-3.06□□□□□ -2.9
snR54snR54 YPR145C-AQ2V2P0 78 aa-3.09□□□□□ -2.9
snR54snR54 YCR075W-AQ3E830 75 aa-3.12□□□□□ -2.91
snR54snR54 HAP1P0CE41 1502 aa-3.13□□□□□ -2.91
snR54snR54 YBL039W-BP0C268 59 aa-3.13□□□□□ -2.91
snR54snR54 ZEO1Q08245 113 aa-3.13□□□□□ -2.91
snR54snR54 YLL006W-AQ3E814 58 aa-3.17□□□□□ -2.92
snR54snR54 RPS27BP38711 82 aa-3.18□□□□□ -2.92
snR54snR54 YGR121W-AQ3E816 71 aa-3.18□□□□□ -2.92
snR54snR54 YOR032W-AQ8TGS1 66 aa-3.18□□□□□ -2.92
snR54snR54 YPL225WQ08971 146 aaKnown RBP-3.2□□□□□ -2.92
snR54snR54 MLP1Q02455 1875 aaKnown RBP-3.21□□□□□ -2.92
snR54snR54 YDR524C-BQ3E6R4 66 aa-3.21□□□□□ -2.92
snR54snR54 QCR9P22289 66 aa-3.23□□□□□ -2.93
snR54snR54 MMS22Q06164 1454 aa-3.23□□□□□ -2.93
snR54snR54 YGR035W-AQ45U48 73 aa-3.24□□□□□ -2.93
snR54snR54 YSP2Q06681 1438 aa-3.28□□□□□ -2.94
snR54snR54 FKS3Q04952 1785 aa-3.29□□□□□ -2.94
snR54snR54 COA2Q3E823 68 aa-3.3□□□□□ -2.94
snR54snR54 SWM2P40342 146 aa-3.31□□□□□ -2.94
snR54snR54 CWP2P43497 92 aa-3.32□□□□□ -2.94
snR54snR54 YGL258W-AQ3E740 77 aa-3.33□□□□□ -2.94
snR54snR54 YDR119W-AQ2V2P9 66 aa-3.35□□□□□ -2.95
snR54snR54 ESC1Q03661 1658 aaKnown RBP-3.36□□□□□ -2.95
snR54snR54 YGR146C-AQ8TGT9 53 aa-3.37□□□□□ -2.95
snR54snR54 YGL194C-AQ2V2P6 80 aa-3.38□□□□□ -2.95
snR54snR54 LTE1P07866 1435 aa-3.38□□□□□ -2.95
snR54snR54 PAU7P39545 55 aa-3.41□□□□□ -2.96
snR54snR54 VPS15P22219 1454 aa-3.41□□□□□ -2.96
snR54snR54 SSS1P35179 80 aa-3.45□□□□□ -2.96
snR54snR54 ESP1Q03018 1630 aa-3.48□□□□□ -2.97
snR54snR54 TIM12P32830 109 aa-3.49□□□□□ -2.97
snR54snR54 ARO1P08566 1588 aaKnown RBP-3.5□□□□□ -2.97
snR54snR54 HUB1Q6Q546 73 aa-3.54□□□□□ -2.98
snR54snR54 YBR230W-AQ3E762 66 aa-3.55□□□□□ -2.98
snR54snR54 YOR072W-BQ3E832 53 aa-3.55□□□□□ -2.98
snR54snR54 ERI1P62651 68 aaKnown RBP-3.64□□□□□ -2.99
snR54snR54 FIG2P25653 1609 aa-3.66□□□□□ -3
snR54snR54 SPI1P40092 148 aa-3.68□□□□□ -3
snR54snR54 DNF2Q12675 1612 aa-3.69□□□□□ -3
snR54snR54 RRP5Q05022 1729 aaKnown RBP-3.72□□□□□ -3
snR54snR54 RPS30AP0CX33 63 aaKnown RBP-3.76□□□□□ -3.01
snR54snR54 RPS30BP0CX34 63 aaKnown RBP-3.76□□□□□ -3.01
snR54snR54 PDR12Q02785 1511 aa-3.76□□□□□ -3.01
snR54snR54 IQG1Q12280 1495 aa-3.78□□□□□ -3.01
snR54snR54 IML1P47170 1584 aa-3.81□□□□□ -3.02
snR54snR54 CSF1Q12150 2958 aa-3.83□□□□□ -3.02
snR54snR54 DNF1P32660 1571 aa-3.83□□□□□ -3.02
snR54snR54 UFD4P33202 1483 aa-3.85□□□□□ -3.03
snR54snR54 YLR157W-DP0CE99 70 aa-3.85□□□□□ -3.03
snR54snR54 PDR15Q04182 1529 aaKnown RBP-3.88□□□□□ -3.03
snR54snR54 THO2P53552 1597 aaKnown RBP-3.91□□□□□ -3.04
snR54snR54 SNQ2P32568 1501 aaKnown RBP-3.91□□□□□ -3.04
snR54snR54 DOP1Q03921 1698 aa-3.94□□□□□ -3.04
snR54snR54 Q0017Q9ZZX8 53 aa-3.95□□□□□ -3.04
snR54snR54 YOL131WQ08270 108 aa-3.96□□□□□ -3.04
snR54snR54 TY1B-DR4Q07793 1604 aa-3.97□□□□□ -3.04
snR54snR54 BCK1Q01389 1478 aa-3.98□□□□□ -3.05
snR54snR54 YOL166W-AQ8TGJ1 51 aa-3.99□□□□□ -3.05
snR54snR54 VMR1P38735 1592 aa-4.01□□□□□ -3.05
snR54snR54 TRA1P38811 3744 aa-4.03□□□□□ -3.05
snR54snR54 YOR093CQ12275 1648 aa-4.03□□□□□ -3.06
snR54snR54 CUP1-1P0CX80 61 aa-4.06□□□□□ -3.06
snR54snR54 CUP1-2P0CX81 61 aa-4.06□□□□□ -3.06
snR54snR54 YFL041W-AQ3E817 63 aa-4.06□□□□□ -3.06
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms