RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 YLR146W-AQ2V2P1 62 aa-6.13□□□□□ -3.39
snR40snR40 YBR200W-AQ3E755 54 aa-6.13□□□□□ -3.39
snR40snR40 GIM4P40005 111 aaKnown RBP-6.14□□□□□ -3.39
snR40snR40 TLG1Q03322 224 aa-6.16□□□□□ -3.4
snR40snR40 RPS20P38701 121 aaKnown RBP-6.18□□□□□ -3.4
snR40snR40 RPB11P38902 120 aa-6.18□□□□□ -3.4
snR40snR40 SNU13P39990 126 aaKnown RBP-6.19□□□□□ -3.4
snR40snR40 FYV7Q12247 151 aa-6.19□□□□□ -3.4
snR40snR40 YML054C-AQ3E809 52 aa-6.19□□□□□ -3.4
snR40snR40 VPS51P36116 164 aa-6.2□□□□□ -3.4
snR40snR40 THO2P53552 1597 aaKnown RBP-6.22□□□□□ -3.4
snR40snR40 YPL225WQ08971 146 aaKnown RBP-6.22□□□□□ -3.41
snR40snR40 YOR011W-AQ3E807 68 aa-6.22□□□□□ -3.41
snR40snR40 NOP10Q6Q547 58 aaPredicted RBP-6.22□□□□□ -3.41
snR40snR40 HAP1P0CE41 1502 aa-6.23□□□□□ -3.41
snR40snR40 YDR042CQ03205 200 aa-6.23□□□□□ -3.41
snR40snR40 RSM19P53733 91 aaPredicted RBP-6.24□□□□□ -3.41
snR40snR40 FKS3Q04952 1785 aa-6.24□□□□□ -3.41
snR40snR40 PDR11P40550 1411 aa-6.31□□□□□ -3.42
snR40snR40 YIL156W-BQ2V2P4 73 aa-6.32□□□□□ -3.42
snR40snR40 YBL039W-BP0C268 59 aa-6.33□□□□□ -3.42
snR40snR40 HMRA1P0CY11 126 aa-6.35□□□□□ -3.43
snR40snR40 YMR105W-AQ8TGS8 64 aa-6.36□□□□□ -3.43
snR40snR40 YDR278CQ05612 105 aa-6.39□□□□□ -3.43
snR40snR40 POL1P13382 1468 aa-6.41□□□□□ -3.43
snR40snR40 YDL022C-AP0C5L6 82 aa-6.42□□□□□ -3.44
snR40snR40 CHD1P32657 1468 aa-6.44□□□□□ -3.44
snR40snR40 NKP2Q06162 153 aa-6.45□□□□□ -3.44
snR40snR40 WIP1Q2V2P8 89 aa-6.45□□□□□ -3.44
snR40snR40 MHF2Q3E829 80 aa-6.47□□□□□ -3.45
snR40snR40 VPS13Q07878 3144 aa-6.48□□□□□ -3.45
snR40snR40 QCR6P00127 147 aa-6.48□□□□□ -3.45
snR40snR40 TIM11P81449 96 aaPredicted RBP-6.48□□□□□ -3.45
snR40snR40 RRT15Q3E811 62 aa-6.48□□□□□ -3.45
snR40snR40 YLR099W-AQ3E798 87 aa-6.49□□□□□ -3.45
snR40snR40 GIM3P53900 129 aa-6.5□□□□□ -3.45
snR40snR40 CMC2Q3E7A4 109 aa-6.51□□□□□ -3.45
snR40snR40 YBR230W-AQ3E762 66 aa-6.54□□□□□ -3.46
snR40snR40 RPA190P10964 1664 aaKnown RBP-6.55□□□□□ -3.46
snR40snR40 SPI1P40092 148 aa-6.56□□□□□ -3.46
snR40snR40 YMR090WQ04304 227 aaKnown RBP-6.57□□□□□ -3.46
snR40snR40 YOR314WQ12506 109 aa-6.57□□□□□ -3.46
snR40snR40 DNF1P32660 1571 aa-6.57□□□□□ -3.46
snR40snR40 RPL29P05747 59 aaPredicted RBP-6.59□□□□□ -3.46
snR40snR40 YOR105WQ08504 108 aa-6.63□□□□□ -3.47
snR40snR40 YMR082CQ04276 118 aa-6.64□□□□□ -3.47
snR40snR40 SIN3P22579 1536 aa-6.66□□□□□ -3.47
snR40snR40 VMA7P39111 118 aa-6.66□□□□□ -3.48
snR40snR40 YDR034C-AP0C289 58 aa-6.68□□□□□ -3.48
snR40snR40 KSH1Q8TGJ3 72 aa-6.68□□□□□ -3.48
snR40snR40 GDB1Q06625 1536 aa-6.7□□□□□ -3.48
snR40snR40 TIM12P32830 109 aa-6.7□□□□□ -3.48
snR40snR40 YGL194C-AQ2V2P6 80 aa-6.74□□□□□ -3.49
snR40snR40 YOR032W-AQ8TGS1 66 aa-6.74□□□□□ -3.49
snR40snR40 YSP2Q06681 1438 aa-6.76□□□□□ -3.49
snR40snR40 SUS1Q6WNK7 96 aa-6.77□□□□□ -3.49
snR40snR40 GEA1P47102 1408 aaPredicted RBP-6.77□□□□□ -3.49
snR40snR40 SPP41P38904 1435 aa-6.78□□□□□ -3.5
snR40snR40 YER039C-AP0CD97 72 aa-6.79□□□□□ -3.5
snR40snR40 SNQ2P32568 1501 aaKnown RBP-6.8□□□□□ -3.5
snR40snR40 DYN2Q02647 92 aa-6.8□□□□□ -3.5
snR40snR40 DNF2Q12675 1612 aa-6.85□□□□□ -3.51
snR40snR40 YKL065W-AQ2V2P2 73 aa-6.85□□□□□ -3.51
snR40snR40 MSL1P40567 111 aaPredicted RBP-6.86□□□□□ -3.51
snR40snR40 TY1B-DR4Q07793 1604 aa-6.9□□□□□ -3.51
snR40snR40 SWR1Q05471 1514 aa-6.91□□□□□ -3.52
snR40snR40 YOR093CQ12275 1648 aa-6.92□□□□□ -3.52
snR40snR40 FLO1P32768 1537 aa-6.92□□□□□ -3.52
snR40snR40 REV3P14284 1504 aa-6.93□□□□□ -3.52
snR40snR40 ESP1Q03018 1630 aa-6.94□□□□□ -3.52
snR40snR40 SSS1P35179 80 aa-6.94□□□□□ -3.52
snR40snR40 HUB1Q6Q546 73 aa-6.94□□□□□ -3.52
snR40snR40 PDR12Q02785 1511 aa-6.96□□□□□ -3.52
snR40snR40 RPS30AP0CX33 63 aaKnown RBP-6.96□□□□□ -3.52
snR40snR40 RPS30BP0CX34 63 aaKnown RBP-6.96□□□□□ -3.52
snR40snR40 YHR073W-AP0C5N7 58 aa-6.98□□□□□ -3.53
snR40snR40 YOR316C-AQ3E806 69 aa-6.99□□□□□ -3.53
snR40snR40 YGR035W-AQ45U48 73 aa-6.99□□□□□ -3.53
snR40snR40 QCR9P22289 66 aa-7.01□□□□□ -3.53
snR40snR40 GEA2P39993 1459 aaKnown RBP-7.02□□□□□ -3.53
snR40snR40 BCK1Q01389 1478 aa-7.02□□□□□ -3.53
snR40snR40 YGR121W-AQ3E816 71 aa-7.02□□□□□ -3.53
snR40snR40 PDR15Q04182 1529 aaKnown RBP-7.03□□□□□ -3.54
snR40snR40 PAU7P39545 55 aa-7.04□□□□□ -3.54
snR40snR40 ULS1Q08562 1619 aa-7.05□□□□□ -3.54
snR40snR40 YPR145C-AQ2V2P0 78 aa-7.06□□□□□ -3.54
snR40snR40 MDS3P53094 1487 aa-7.07□□□□□ -3.54
snR40snR40 SWM2P40342 146 aa-7.08□□□□□ -3.54
snR40snR40 YMR175W-AQ3E766 64 aa-7.1□□□□□ -3.55
snR40snR40 SSK2P53599 1579 aa-7.12□□□□□ -3.55
snR40snR40 RRP5Q05022 1729 aaKnown RBP-7.13□□□□□ -3.55
snR40snR40 YLR157W-DP0CE99 70 aa-7.14□□□□□ -3.55
snR40snR40 ARO1P08566 1588 aaKnown RBP-7.17□□□□□ -3.56
snR40snR40 TSC11P40061 1430 aa-7.18□□□□□ -3.56
snR40snR40 PDR5P33302 1511 aaKnown RBP-7.19□□□□□ -3.56
snR40snR40 RPO31P04051 1460 aa-7.21□□□□□ -3.56
snR40snR40 MLP1Q02455 1875 aaKnown RBP-7.21□□□□□ -3.56
snR40snR40 RPS12P48589 143 aaKnown RBP-7.27□□□□□ -3.57
snR40snR40 GCN2P15442 1659 aa-7.28□□□□□ -3.58
snR40snR40 MMS22Q06164 1454 aa-7.29□□□□□ -3.58
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms