RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B SMD2Q06217 110 aaKnown RBP-2.37□□□□□ -2.79
snR39BsnR39B THO2P53552 1597 aaKnown RBP-2.37□□□□□ -2.79
snR39BsnR39B VMA21P41806 77 aa-2.38□□□□□ -2.79
snR39BsnR39B YOR011W-AQ3E807 68 aa-2.38□□□□□ -2.79
snR39BsnR39B YKL068W-AQ3E826 78 aa-2.38□□□□□ -2.79
snR39BsnR39B YLR365WQ7LIF2 110 aa-2.39□□□□□ -2.79
snR39BsnR39B YBL039W-BP0C268 59 aa-2.4□□□□□ -2.79
snR39BsnR39B RPS20P38701 121 aaKnown RBP-2.4□□□□□ -2.79
snR39BsnR39B TLG1Q03322 224 aa-2.4□□□□□ -2.79
snR39BsnR39B KOG1P38873 1557 aa-2.4□□□□□ -2.79
snR39BsnR39B YDR034C-AP0C289 58 aa-2.41□□□□□ -2.8
snR39BsnR39B GNA1P43577 159 aaPredicted RBP-2.42□□□□□ -2.8
snR39BsnR39B SNU13P39990 126 aaKnown RBP-2.43□□□□□ -2.8
snR39BsnR39B NOP10Q6Q547 58 aaPredicted RBP-2.43□□□□□ -2.8
snR39BsnR39B HAP1P0CE41 1502 aa-2.44□□□□□ -2.8
snR39BsnR39B YHR073W-AP0C5N7 58 aa-2.45□□□□□ -2.8
snR39BsnR39B YAR029WP39549 74 aa-2.45□□□□□ -2.8
snR39BsnR39B SPC2Q04969 178 aa-2.45□□□□□ -2.8
snR39BsnR39B WIP1Q2V2P8 89 aa-2.45□□□□□ -2.8
snR39BsnR39B YBR230W-AQ3E762 66 aa-2.45□□□□□ -2.8
snR39BsnR39B MYO2P19524 1574 aaKnown RBP-2.45□□□□□ -2.8
snR39BsnR39B CHD1P32657 1468 aa-2.45□□□□□ -2.8
snR39BsnR39B BPT1P14772 1559 aa-2.47□□□□□ -2.8
snR39BsnR39B SPI1P40092 148 aa-2.47□□□□□ -2.8
snR39BsnR39B SWC7Q06707 132 aa-2.47□□□□□ -2.8
snR39BsnR39B POL1P13382 1468 aa-2.47□□□□□ -2.81
snR39BsnR39B XRN1P22147 1528 aaKnown RBP-2.47□□□□□ -2.81
snR39BsnR39B RPB11P38902 120 aa-2.48□□□□□ -2.81
snR39BsnR39B YMR082CQ04276 118 aa-2.48□□□□□ -2.81
snR39BsnR39B YIL156W-BQ2V2P4 73 aa-2.48□□□□□ -2.81
snR39BsnR39B RPS30AP0CX33 63 aaKnown RBP-2.49□□□□□ -2.81
snR39BsnR39B RPS30BP0CX34 63 aaKnown RBP-2.49□□□□□ -2.81
snR39BsnR39B TIM12P32830 109 aa-2.49□□□□□ -2.81
snR39BsnR39B MHF2Q3E829 80 aa-2.49□□□□□ -2.81
snR39BsnR39B RSM19P53733 91 aaPredicted RBP-2.5□□□□□ -2.81
snR39BsnR39B YDR278CQ05612 105 aa-2.5□□□□□ -2.81
snR39BsnR39B YDL022C-AP0C5L6 82 aa-2.51□□□□□ -2.81
snR39BsnR39B APC1P53886 1748 aa-2.51□□□□□ -2.81
snR39BsnR39B PDR11P40550 1411 aa-2.51□□□□□ -2.81
snR39BsnR39B DNF1P32660 1571 aa-2.52□□□□□ -2.81
snR39BsnR39B TOM1Q03280 3268 aa-2.52□□□□□ -2.81
snR39BsnR39B HMRA1P0CY11 126 aa-2.52□□□□□ -2.81
snR39BsnR39B YOR314WQ12506 109 aa-2.52□□□□□ -2.81
snR39BsnR39B YGL194C-AQ2V2P6 80 aa-2.52□□□□□ -2.81
snR39BsnR39B YSP2Q06681 1438 aa-2.52□□□□□ -2.81
snR39BsnR39B BCK1Q01389 1478 aa-2.52□□□□□ -2.81
snR39BsnR39B YOR105WQ08504 108 aa-2.55□□□□□ -2.82
snR39BsnR39B YOR316C-AQ3E806 69 aa-2.55□□□□□ -2.82
snR39BsnR39B ULS1Q08562 1619 aa-2.56□□□□□ -2.82
snR39BsnR39B DNF2Q12675 1612 aa-2.57□□□□□ -2.82
snR39BsnR39B QCR6P00127 147 aa-2.57□□□□□ -2.82
snR39BsnR39B SWM2P40342 146 aa-2.57□□□□□ -2.82
snR39BsnR39B NKP2Q06162 153 aa-2.57□□□□□ -2.82
snR39BsnR39B YLR099W-AQ3E798 87 aa-2.57□□□□□ -2.82
snR39BsnR39B HUB1Q6Q546 73 aa-2.57□□□□□ -2.82
snR39BsnR39B FLO1P32768 1537 aa-2.58□□□□□ -2.82
snR39BsnR39B UTP10P42945 1769 aaKnown RBP-2.59□□□□□ -2.82
snR39BsnR39B RRT15Q3E811 62 aa-2.59□□□□□ -2.82
snR39BsnR39B YOR032W-AQ8TGS1 66 aa-2.59□□□□□ -2.82
snR39BsnR39B SNQ2P32568 1501 aaKnown RBP-2.59□□□□□ -2.82
snR39BsnR39B YMR090WQ04304 227 aaKnown RBP-2.61□□□□□ -2.83
snR39BsnR39B ESP1Q03018 1630 aa-2.62□□□□□ -2.83
snR39BsnR39B SSS1P35179 80 aa-2.63□□□□□ -2.83
snR39BsnR39B RPA190P10964 1664 aaKnown RBP-2.63□□□□□ -2.83
snR39BsnR39B SPP41P38904 1435 aa-2.64□□□□□ -2.83
snR39BsnR39B YKL065W-AQ2V2P2 73 aa-2.64□□□□□ -2.83
snR39BsnR39B FKS3Q04952 1785 aa-2.64□□□□□ -2.83
snR39BsnR39B SIN3P22579 1536 aa-2.66□□□□□ -2.84
snR39BsnR39B SUS1Q6WNK7 96 aa-2.66□□□□□ -2.84
snR39BsnR39B TY1B-DR4Q07793 1604 aa-2.67□□□□□ -2.84
snR39BsnR39B YLR157W-DP0CE99 70 aa-2.67□□□□□ -2.84
snR39BsnR39B YJL133C-AQ3E7A3 74 aa-2.67□□□□□ -2.84
snR39BsnR39B SSK2P53599 1579 aa-2.67□□□□□ -2.84
snR39BsnR39B RPO31P04051 1460 aa-2.68□□□□□ -2.84
snR39BsnR39B PAU7P39545 55 aa-2.69□□□□□ -2.84
snR39BsnR39B PDR5P33302 1511 aaKnown RBP-2.69□□□□□ -2.84
snR39BsnR39B YCF1P39109 1515 aaKnown RBP-2.69□□□□□ -2.84
snR39BsnR39B YOR093CQ12275 1648 aa-2.7□□□□□ -2.84
snR39BsnR39B QCR9P22289 66 aa-2.7□□□□□ -2.84
snR39BsnR39B VMA7P39111 118 aa-2.7□□□□□ -2.84
snR39BsnR39B DYN2Q02647 92 aa-2.7□□□□□ -2.84
snR39BsnR39B KSH1Q8TGJ3 72 aa-2.7□□□□□ -2.84
snR39BsnR39B GDB1Q06625 1536 aa-2.71□□□□□ -2.84
snR39BsnR39B PDR12Q02785 1511 aa-2.72□□□□□ -2.84
snR39BsnR39B PDR15Q04182 1529 aaKnown RBP-2.72□□□□□ -2.84
snR39BsnR39B MSL1P40567 111 aaPredicted RBP-2.72□□□□□ -2.84
snR39BsnR39B YGR035W-AQ45U48 73 aa-2.73□□□□□ -2.85
snR39BsnR39B YPR145C-AQ2V2P0 78 aa-2.74□□□□□ -2.85
snR39BsnR39B YGR121W-AQ3E816 71 aa-2.75□□□□□ -2.85
snR39BsnR39B MDS3P53094 1487 aa-2.77□□□□□ -2.85
snR39BsnR39B YER039C-AP0CD97 72 aa-2.77□□□□□ -2.85
snR39BsnR39B RPS12P48589 143 aaKnown RBP-2.77□□□□□ -2.85
snR39BsnR39B GEA1P47102 1408 aaPredicted RBP-2.77□□□□□ -2.85
snR39BsnR39B YER137CP40083 148 aaKnown RBP-2.79□□□□□ -2.86
snR39BsnR39B YOL131WQ08270 108 aa-2.79□□□□□ -2.86
snR39BsnR39B GCN2P15442 1659 aa-2.79□□□□□ -2.86
snR39BsnR39B SWR1Q05471 1514 aa-2.81□□□□□ -2.86
snR39BsnR39B YOR304C-AO14468 76 aa-2.82□□□□□ -2.86
snR39BsnR39B ESC1Q03661 1658 aaKnown RBP-2.82□□□□□ -2.86
snR39BsnR39B REV3P14284 1504 aa-2.83□□□□□ -2.86
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms