RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W SMC4Q12267 1418 aa-1.4□□□□□ -2.63
SGF11YPL047W RPA190P10964 1664 aaKnown RBP-1.41□□□□□ -2.63
SGF11YPL047W RPS27AP35997 82 aaKnown RBP-1.41□□□□□ -2.64
SGF11YPL047W POC4Q12245 148 aaPredicted RBP-1.41□□□□□ -2.64
SGF11YPL047W YLR146W-AQ2V2P1 62 aa-1.41□□□□□ -2.64
SGF11YPL047W YIL156W-BQ2V2P4 73 aa-1.41□□□□□ -2.64
SGF11YPL047W TEL1P38110 2787 aa-1.42□□□□□ -2.64
SGF11YPL047W MEC1P38111 2368 aa-1.42□□□□□ -2.64
SGF11YPL047W XRN1P22147 1528 aaKnown RBP-1.42□□□□□ -2.64
SGF11YPL047W YOR105WQ08504 108 aa-1.43□□□□□ -2.64
SGF11YPL047W GDB1Q06625 1536 aa-1.44□□□□□ -2.64
SGF11YPL047W LSM2P38203 95 aaKnown RBP-1.44□□□□□ -2.64
SGF11YPL047W UTP10P42945 1769 aaKnown RBP-1.44□□□□□ -2.64
SGF11YPL047W YOR343CQ12484 108 aa-1.48□□□□□ -2.65
SGF11YPL047W YOR394C-AQ8TGJ0 55 aa-1.48□□□□□ -2.65
SGF11YPL047W IRC20Q06554 1556 aa-1.49□□□□□ -2.65
SGF11YPL047W YBR200W-AQ3E755 54 aa-1.5□□□□□ -2.65
SGF11YPL047W APC1P53886 1748 aa-1.5□□□□□ -2.65
SGF11YPL047W SWR1Q05471 1514 aa-1.5□□□□□ -2.65
SGF11YPL047W YDL022C-AP0C5L6 82 aa-1.51□□□□□ -2.65
SGF11YPL047W YLL006W-AQ3E814 58 aa-1.51□□□□□ -2.65
SGF11YPL047W YPL225WQ08971 146 aaKnown RBP-1.52□□□□□ -2.65
SGF11YPL047W YCL001W-BQ96VH2 84 aa-1.52□□□□□ -2.65
SGF11YPL047W COA2Q3E823 68 aa-1.53□□□□□ -2.65
SGF11YPL047W YOR314WQ12506 109 aa-1.54□□□□□ -2.66
SGF11YPL047W YOR011W-AQ3E807 68 aa-1.54□□□□□ -2.66
SGF11YPL047W GCN1P33892 2672 aaKnown RBP-1.54□□□□□ -2.66
SGF11YPL047W KOG1P38873 1557 aa-1.55□□□□□ -2.66
SGF11YPL047W ATP17Q06405 101 aa-1.55□□□□□ -2.66
SGF11YPL047W YGL258W-AQ3E740 77 aa-1.55□□□□□ -2.66
SGF11YPL047W YBL039W-BP0C268 59 aa-1.56□□□□□ -2.66
SGF11YPL047W YKL065W-AQ2V2P2 73 aa-1.57□□□□□ -2.66
SGF11YPL047W YDR524C-BQ3E6R4 66 aa-1.58□□□□□ -2.66
SGF11YPL047W YDR119W-AQ2V2P9 66 aa-1.59□□□□□ -2.66
SGF11YPL047W RPO21P04050 1733 aaKnown RBP-1.6□□□□□ -2.67
SGF11YPL047W SIN3P22579 1536 aa-1.6□□□□□ -2.67
SGF11YPL047W ZEO1Q08245 113 aa-1.6□□□□□ -2.67
SGF11YPL047W YMR175W-AQ3E766 64 aa-1.6□□□□□ -2.67
SGF11YPL047W TY3B-GQ99315 1547 aa-1.61□□□□□ -2.67
SGF11YPL047W YPR145C-AQ2V2P0 78 aa-1.61□□□□□ -2.67
SGF11YPL047W MDS3P53094 1487 aa-1.62□□□□□ -2.67
SGF11YPL047W YMR082CQ04276 118 aa-1.62□□□□□ -2.67
SGF11YPL047W YOR032W-AQ8TGS1 66 aa-1.64□□□□□ -2.67
SGF11YPL047W PDR10P51533 1564 aa-1.64□□□□□ -2.67
SGF11YPL047W MDN1Q12019 4910 aaKnown RBP-1.66□□□□□ -2.68
SGF11YPL047W QCR9P22289 66 aa-1.66□□□□□ -2.68
SGF11YPL047W RPS27BP38711 82 aa-1.66□□□□□ -2.68
SGF11YPL047W YCR075W-AQ3E830 75 aa-1.67□□□□□ -2.68
SGF11YPL047W YGR146C-AQ8TGT9 53 aa-1.68□□□□□ -2.68
SGF11YPL047W HAP1P0CE41 1502 aa-1.68□□□□□ -2.68
SGF11YPL047W YOR072W-BQ3E832 53 aa-1.69□□□□□ -2.68
SGF11YPL047W YGR121W-AQ3E816 71 aa-1.7□□□□□ -2.68
SGF11YPL047W SSS1P35179 80 aa-1.71□□□□□ -2.68
SGF11YPL047W PAU7P39545 55 aa-1.71□□□□□ -2.68
SGF11YPL047W CWP2P43497 92 aa-1.71□□□□□ -2.68
SGF11YPL047W SWM2P40342 146 aa-1.72□□□□□ -2.68
SGF11YPL047W YGR035W-AQ45U48 73 aa-1.72□□□□□ -2.68
SGF11YPL047W DYN1P36022 4092 aa-1.72□□□□□ -2.69
SGF11YPL047W VPS15P22219 1454 aa-1.73□□□□□ -2.69
SGF11YPL047W MMS22Q06164 1454 aa-1.75□□□□□ -2.69
SGF11YPL047W YBR230W-AQ3E762 66 aa-1.76□□□□□ -2.69
SGF11YPL047W HUB1Q6Q546 73 aa-1.76□□□□□ -2.69
SGF11YPL047W YGL194C-AQ2V2P6 80 aa-1.79□□□□□ -2.7
SGF11YPL047W LTE1P07866 1435 aa-1.8□□□□□ -2.7
SGF11YPL047W TIM12P32830 109 aa-1.8□□□□□ -2.7
SGF11YPL047W MLP1Q02455 1875 aaKnown RBP-1.82□□□□□ -2.7
SGF11YPL047W FKS3Q04952 1785 aa-1.84□□□□□ -2.7
SGF11YPL047W YSP2Q06681 1438 aa-1.86□□□□□ -2.71
SGF11YPL047W SPI1P40092 148 aa-1.87□□□□□ -2.71
SGF11YPL047W ERI1P62651 68 aaKnown RBP-1.89□□□□□ -2.71
SGF11YPL047W YOR192C-CQ3E736 78 aa-1.89□□□□□ -2.71
SGF11YPL047W Q0017Q9ZZX8 53 aa-1.89□□□□□ -2.71
SGF11YPL047W FIG2P25653 1609 aa-1.9□□□□□ -2.71
SGF11YPL047W RPS30AP0CX33 63 aaKnown RBP-1.92□□□□□ -2.72
SGF11YPL047W RPS30BP0CX34 63 aaKnown RBP-1.92□□□□□ -2.72
SGF11YPL047W YLR157W-DP0CE99 70 aa-1.93□□□□□ -2.72
SGF11YPL047W YOL131WQ08270 108 aa-1.95□□□□□ -2.72
SGF11YPL047W ESC1Q03661 1658 aaKnown RBP-1.96□□□□□ -2.72
SGF11YPL047W ARO1P08566 1588 aaKnown RBP-1.97□□□□□ -2.72
SGF11YPL047W IQG1Q12280 1495 aa-1.97□□□□□ -2.72
SGF11YPL047W DNF1P32660 1571 aa-1.98□□□□□ -2.73
SGF11YPL047W DNF2Q12675 1612 aa-1.99□□□□□ -2.73
SGF11YPL047W CUP1-1P0CX80 61 aa-1.99□□□□□ -2.73
SGF11YPL047W CUP1-2P0CX81 61 aa-1.99□□□□□ -2.73
SGF11YPL047W ESP1Q03018 1630 aa-1.99□□□□□ -2.73
SGF11YPL047W PDR12Q02785 1511 aa-2.01□□□□□ -2.73
SGF11YPL047W RRP5Q05022 1729 aaKnown RBP-2.03□□□□□ -2.73
SGF11YPL047W SNQ2P32568 1501 aaKnown RBP-2.03□□□□□ -2.73
SGF11YPL047W UFD4P33202 1483 aa-2.04□□□□□ -2.74
SGF11YPL047W YML054C-AQ3E809 52 aa-2.04□□□□□ -2.74
SGF11YPL047W IML1P47170 1584 aa-2.05□□□□□ -2.74
SGF11YPL047W PDR15Q04182 1529 aaKnown RBP-2.05□□□□□ -2.74
SGF11YPL047W THO2P53552 1597 aaKnown RBP-2.06□□□□□ -2.74
SGF11YPL047W YSY6P38374 65 aa-2.08□□□□□ -2.74
SGF11YPL047W YOL166W-AQ8TGJ1 51 aa-2.09□□□□□ -2.74
SGF11YPL047W YFL041W-AQ3E817 63 aa-2.1□□□□□ -2.75
SGF11YPL047W CSF1Q12150 2958 aa-2.12□□□□□ -2.75
SGF11YPL047W YDR034C-AP0C289 58 aa-2.13□□□□□ -2.75
SGF11YPL047W YOR093CQ12275 1648 aa-2.13□□□□□ -2.75
SGF11YPL047W RPL29P05747 59 aaPredicted RBP-2.14□□□□□ -2.75
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms