RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C DAD4P69851 72 aa3.95□□□□□ -1.78
VBA1YMR088C RPS11AP0CX47 156 aaKnown RBP3.94□□□□□ -1.78
VBA1YMR088C RPS11BP0CX48 156 aaKnown RBP3.94□□□□□ -1.78
VBA1YMR088C RPL38P49167 78 aaKnown RBP3.94□□□□□ -1.78
VBA1YMR088C MRPS12P53732 153 aa3.94□□□□□ -1.78
VBA1YMR088C YBR027CP38220 110 aa3.94□□□□□ -1.78
VBA1YMR088C YBR219CP38317 127 aa3.94□□□□□ -1.78
VBA1YMR088C YCL048W-AQ2V2Q2 79 aa3.94□□□□□ -1.78
VBA1YMR088C YCR001WP25347 104 aa3.91□□□□□ -1.78
VBA1YMR088C YOR008C-AQ3E7B9 74 aa3.91□□□□□ -1.78
VBA1YMR088C YCR022CP25620 114 aa3.9□□□□□ -1.78
VBA1YMR088C ATP17Q06405 101 aa3.9□□□□□ -1.78
VBA1YMR088C CCW12Q12127 133 aa3.9□□□□□ -1.78
VBA1YMR088C ATP18P81450 59 aa3.9□□□□□ -1.79
VBA1YMR088C YSF3P0C074 85 aaPredicted RBP3.89□□□□□ -1.79
VBA1YMR088C YIL102CP40488 101 aa3.89□□□□□ -1.79
VBA1YMR088C YMR141CP40211 102 aa3.88□□□□□ -1.79
VBA1YMR088C YJR085CP47131 105 aaKnown RBP3.87□□□□□ -1.79
VBA1YMR088C YGL258W-AQ3E740 77 aa3.87□□□□□ -1.79
VBA1YMR088C CMC4Q3E7A9 73 aa3.87□□□□□ -1.79
VBA1YMR088C ECM19Q06011 112 aa3.86□□□□□ -1.79
VBA1YMR088C YLR157W-DP0CE99 70 aa3.85□□□□□ -1.79
VBA1YMR088C FPR1P20081 114 aaKnown RBP3.85□□□□□ -1.79
VBA1YMR088C YEL014CP39999 101 aa3.85□□□□□ -1.79
VBA1YMR088C YMR254CQ04838 102 aa3.85□□□□□ -1.79
VBA1YMR088C AQY2P0CD90 149 aa3.84□□□□□ -1.79
VBA1YMR088C SDH6Q3E785 79 aa3.84□□□□□ -1.79
VBA1YMR088C YMR001C-AQ8TGS9 76 aa3.84□□□□□ -1.79
VBA1YMR088C YHR032W-AP0C5N6 59 aa3.84□□□□□ -1.8
VBA1YMR088C YNL122CP53921 115 aaPredicted RBP3.84□□□□□ -1.8
VBA1YMR088C YLR342W-AQ3E810 57 aa3.84□□□□□ -1.8
VBA1YMR088C BRR2P32639 2163 aaKnown RBP3.83□□□□□ -1.8
VBA1YMR088C SGF11Q03067 99 aa3.83□□□□□ -1.8
VBA1YMR088C FAS1P07149 2051 aaKnown RBP3.82□□□□□ -1.8
VBA1YMR088C YGL014C-AP0C5N1 53 aa3.82□□□□□ -1.8
VBA1YMR088C YDR115WQ04598 105 aa3.82□□□□□ -1.8
VBA1YMR088C YPR010C-AA5Z2X5 72 aa3.81□□□□□ -1.8
VBA1YMR088C YFR009W-AP0C5M9 85 aa3.81□□□□□ -1.8
VBA1YMR088C YNL162W-AQ3E7A8 72 aa3.81□□□□□ -1.8
VBA1YMR088C YPR195CQ06594 109 aa3.79□□□□□ -1.8
VBA1YMR088C LCL2Q08045 131 aa3.79□□□□□ -1.8
VBA1YMR088C COX8P04039 78 aa3.78□□□□□ -1.81
VBA1YMR088C YDR210WQ03482 75 aa3.78□□□□□ -1.81
VBA1YMR088C RPL33BP41056 107 aaKnown RBP3.77□□□□□ -1.81
VBA1YMR088C YJR146WP47174 117 aa3.77□□□□□ -1.81
VBA1YMR088C YDR114CQ04597 100 aa3.76□□□□□ -1.81
VBA1YMR088C YOL013W-AP0C272 63 aaPredicted RBP3.75□□□□□ -1.81
VBA1YMR088C YMR122W-AQ3E842 84 aa3.75□□□□□ -1.81
VBA1YMR088C YEL008WP40001 126 aa3.74□□□□□ -1.81
VBA1YMR088C YFL067WP43537 175 aa3.73□□□□□ -1.81
VBA1YMR088C YAL067W-AQ8TGK6 75 aa3.73□□□□□ -1.81
VBA1YMR088C YJL027CP47063 138 aaPredicted RBP3.72□□□□□ -1.81
VBA1YMR088C YGL041C-BQ3E750 60 aa3.72□□□□□ -1.81
VBA1YMR088C Q0032Q9ZZX7 96 aa3.7□□□□□ -1.82
VBA1YMR088C YOL097W-AQ3E7Y9 61 aa3.69□□□□□ -1.82
VBA1YMR088C YBR201C-AQ2V2Q3 67 aa3.68□□□□□ -1.82
VBA1YMR088C YLL006W-AQ3E814 58 aa3.68□□□□□ -1.82
VBA1YMR088C YBL039W-BP0C268 59 aa3.68□□□□□ -1.82
VBA1YMR088C SEN1Q00416 2231 aaKnown RBP3.67□□□□□ -1.82
VBA1YMR088C BLM10P43583 2143 aa3.67□□□□□ -1.82
VBA1YMR088C RPL33AP05744 107 aaKnown RBP3.66□□□□□ -1.82
VBA1YMR088C NCE101Q02820 53 aa3.65□□□□□ -1.82
VBA1YMR088C VAM10Q08474 114 aa3.65□□□□□ -1.82
VBA1YMR088C YOL085CQ99345 113 aa3.65□□□□□ -1.82
VBA1YMR088C YDL012CQ12489 107 aa3.65□□□□□ -1.83
VBA1YMR088C YHR213W-BQ8TGK1 99 aa3.65□□□□□ -1.83
VBA1YMR088C YER084WP40057 128 aa3.63□□□□□ -1.83
VBA1YMR088C MVB12P42939 101 aa3.63□□□□□ -1.83
VBA1YMR088C YGR025WP53216 100 aa3.63□□□□□ -1.83
VBA1YMR088C BEM2P39960 2167 aaKnown RBP3.62□□□□□ -1.83
VBA1YMR088C AUA1P32450 94 aa3.62□□□□□ -1.83
VBA1YMR088C YJL133C-AQ3E7A3 74 aa3.62□□□□□ -1.83
VBA1YMR088C YGR240C-AQ3E786 66 aa3.61□□□□□ -1.83
VBA1YMR088C YBR200W-AQ3E755 54 aa3.59□□□□□ -1.83
VBA1YMR088C SEC16P48415 2195 aaKnown RBP3.59□□□□□ -1.84
VBA1YMR088C TOM1Q03280 3268 aa3.59□□□□□ -1.84
VBA1YMR088C YLR255CO13574 117 aa3.59□□□□□ -1.84
VBA1YMR088C YOR011W-AQ3E807 68 aa3.59□□□□□ -1.84
VBA1YMR088C SIP18P50263 79 aa3.58□□□□□ -1.84
VBA1YMR088C YJL144WP47009 104 aa3.57□□□□□ -1.84
VBA1YMR088C YOR072WQ08486 104 aa3.56□□□□□ -1.84
VBA1YMR088C YHR007C-AQ07074 71 aa3.55□□□□□ -1.84
VBA1YMR088C RPL29P05747 59 aaPredicted RBP3.55□□□□□ -1.84
VBA1YMR088C YCL042WP25572 119 aa3.54□□□□□ -1.84
VBA1YMR088C YAR064WP39563 99 aa3.54□□□□□ -1.84
VBA1YMR088C TAR1Q8TGM6 124 aa3.54□□□□□ -1.84
VBA1YMR088C FAB1P34756 2278 aa3.53□□□□□ -1.84
VBA1YMR088C YIL086CP40503 102 aa3.53□□□□□ -1.84
VBA1YMR088C YLR307C-AQ3E825 87 aa3.52□□□□□ -1.85
VBA1YMR088C ACC1Q00955 2233 aaKnown RBP3.51□□□□□ -1.85
VBA1YMR088C COX7P10174 60 aa3.51□□□□□ -1.85
VBA1YMR088C YBR230W-AQ3E762 66 aa3.5□□□□□ -1.85
VBA1YMR088C YJL127C-BQ3E828 52 aa3.49□□□□□ -1.85
VBA1YMR088C YOR394C-AQ8TGJ0 55 aa3.49□□□□□ -1.85
VBA1YMR088C DDR2P89113 61 aa3.48□□□□□ -1.85
VBA1YMR088C YJR128WP47162 119 aa3.47□□□□□ -1.85
VBA1YMR088C PMP3P87284 55 aa3.47□□□□□ -1.85
VBA1YMR088C LCL1Q02786 101 aa3.43□□□□□ -1.86
VBA1YMR088C RPS27AP35997 82 aaKnown RBP3.42□□□□□ -1.86
VBA1YMR088C RPS27BP38711 82 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms