RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W TY2B-DR1Q12472 1770 aa-1.3□□□□□ -2.62
LOC1YFR001W TY2B-BQ12491 1770 aa-1.3□□□□□ -2.62
LOC1YFR001W TY2B-OR2Q12501 1770 aa-1.3□□□□□ -2.62
LOC1YFR001W VTH1P40438 1549 aa-1.3□□□□□ -2.62
LOC1YFR001W VTH2P40890 1549 aa-1.3□□□□□ -2.62
LOC1YFR001W DYN1P36022 4092 aa-1.32□□□□□ -2.62
LOC1YFR001W XRN1P22147 1528 aaKnown RBP-1.32□□□□□ -2.62
LOC1YFR001W SWR1Q05471 1514 aa-1.32□□□□□ -2.62
LOC1YFR001W YIL156W-BQ2V2P4 73 aa-1.33□□□□□ -2.62
LOC1YFR001W TY1B-NL2Q99337 1749 aaKnown RBP-1.35□□□□□ -2.62
LOC1YFR001W OLI1P61829 76 aa-1.35□□□□□ -2.63
LOC1YFR001W ZEO1Q08245 113 aa-1.36□□□□□ -2.63
LOC1YFR001W SPO14P36126 1683 aa-1.36□□□□□ -2.63
LOC1YFR001W RPS27AP35997 82 aaKnown RBP-1.37□□□□□ -2.63
LOC1YFR001W POC4Q12245 148 aaPredicted RBP-1.37□□□□□ -2.63
LOC1YFR001W PDR10P51533 1564 aa-1.38□□□□□ -2.63
LOC1YFR001W LSM2P38203 95 aaKnown RBP-1.39□□□□□ -2.63
LOC1YFR001W YOR343CQ12484 108 aa-1.39□□□□□ -2.63
LOC1YFR001W YCL001W-BQ96VH2 84 aa-1.39□□□□□ -2.63
LOC1YFR001W SMC4Q12267 1418 aa-1.4□□□□□ -2.63
LOC1YFR001W RPO21P04050 1733 aaKnown RBP-1.4□□□□□ -2.63
LOC1YFR001W YMR082CQ04276 118 aa-1.42□□□□□ -2.64
LOC1YFR001W YMR175W-AQ3E766 64 aa-1.42□□□□□ -2.64
LOC1YFR001W COA2Q3E823 68 aa-1.42□□□□□ -2.64
LOC1YFR001W YLR146W-AQ2V2P1 62 aa-1.43□□□□□ -2.64
LOC1YFR001W YOR105WQ08504 108 aa-1.44□□□□□ -2.64
LOC1YFR001W YDR524C-BQ3E6R4 66 aa-1.44□□□□□ -2.64
LOC1YFR001W YLL006W-AQ3E814 58 aa-1.44□□□□□ -2.64
LOC1YFR001W YOR394C-AQ8TGJ0 55 aa-1.44□□□□□ -2.64
LOC1YFR001W IRC20Q06554 1556 aa-1.46□□□□□ -2.64
LOC1YFR001W YGL258W-AQ3E740 77 aa-1.46□□□□□ -2.64
LOC1YFR001W YBR200W-AQ3E755 54 aa-1.46□□□□□ -2.64
LOC1YFR001W YCR075W-AQ3E830 75 aa-1.47□□□□□ -2.64
LOC1YFR001W YDR119W-AQ2V2P9 66 aa-1.48□□□□□ -2.65
LOC1YFR001W YOR011W-AQ3E807 68 aa-1.49□□□□□ -2.65
LOC1YFR001W YDL022C-AP0C5L6 82 aa-1.5□□□□□ -2.65
LOC1YFR001W YPL225WQ08971 146 aaKnown RBP-1.5□□□□□ -2.65
LOC1YFR001W YBL039W-BP0C268 59 aa-1.53□□□□□ -2.65
LOC1YFR001W ATP17Q06405 101 aa-1.53□□□□□ -2.65
LOC1YFR001W YOR072W-BQ3E832 53 aa-1.53□□□□□ -2.65
LOC1YFR001W APC1P53886 1748 aa-1.54□□□□□ -2.66
LOC1YFR001W KOG1P38873 1557 aa-1.54□□□□□ -2.66
LOC1YFR001W TY3B-GQ99315 1547 aa-1.54□□□□□ -2.66
LOC1YFR001W YOR314WQ12506 109 aa-1.54□□□□□ -2.66
LOC1YFR001W YKL065W-AQ2V2P2 73 aa-1.55□□□□□ -2.66
LOC1YFR001W RPS27BP38711 82 aa-1.56□□□□□ -2.66
LOC1YFR001W YGR146C-AQ8TGT9 53 aa-1.57□□□□□ -2.66
LOC1YFR001W YPR145C-AQ2V2P0 78 aa-1.59□□□□□ -2.66
LOC1YFR001W VPS15P22219 1454 aa-1.59□□□□□ -2.66
LOC1YFR001W HAP1P0CE41 1502 aa-1.61□□□□□ -2.67
LOC1YFR001W SIN3P22579 1536 aa-1.62□□□□□ -2.67
LOC1YFR001W YOR032W-AQ8TGS1 66 aa-1.63□□□□□ -2.67
LOC1YFR001W QCR9P22289 66 aa-1.64□□□□□ -2.67
LOC1YFR001W YBR230W-AQ3E762 66 aa-1.64□□□□□ -2.67
LOC1YFR001W CUP1-1P0CX80 61 aa-1.66□□□□□ -2.68
LOC1YFR001W CUP1-2P0CX81 61 aa-1.66□□□□□ -2.68
LOC1YFR001W Q0017Q9ZZX8 53 aa-1.66□□□□□ -2.68
LOC1YFR001W YGR121W-AQ3E816 71 aa-1.67□□□□□ -2.68
LOC1YFR001W SSS1P35179 80 aa-1.68□□□□□ -2.68
LOC1YFR001W PAU7P39545 55 aa-1.68□□□□□ -2.68
LOC1YFR001W YGR035W-AQ45U48 73 aa-1.68□□□□□ -2.68
LOC1YFR001W SWM2P40342 146 aa-1.69□□□□□ -2.68
LOC1YFR001W CWP2P43497 92 aa-1.69□□□□□ -2.68
LOC1YFR001W YGL194C-AQ2V2P6 80 aa-1.69□□□□□ -2.68
LOC1YFR001W YOR192C-CQ3E736 78 aa-1.69□□□□□ -2.68
LOC1YFR001W HUB1Q6Q546 73 aa-1.69□□□□□ -2.68
LOC1YFR001W SPI1P40092 148 aa-1.71□□□□□ -2.68
LOC1YFR001W YSP2Q06681 1438 aa-1.72□□□□□ -2.68
LOC1YFR001W FIG2P25653 1609 aa-1.72□□□□□ -2.68
LOC1YFR001W MMS22Q06164 1454 aa-1.73□□□□□ -2.69
LOC1YFR001W NUM1Q00402 2748 aa-1.74□□□□□ -2.69
LOC1YFR001W CSF1Q12150 2958 aa-1.76□□□□□ -2.69
LOC1YFR001W MLP1Q02455 1875 aaKnown RBP-1.76□□□□□ -2.69
LOC1YFR001W TIM12P32830 109 aa-1.77□□□□□ -2.69
LOC1YFR001W LTE1P07866 1435 aa-1.78□□□□□ -2.69
LOC1YFR001W YML054C-AQ3E809 52 aa-1.79□□□□□ -2.7
LOC1YFR001W DNF1P32660 1571 aa-1.8□□□□□ -2.7
LOC1YFR001W ESC1Q03661 1658 aaKnown RBP-1.82□□□□□ -2.7
LOC1YFR001W YLR157W-DP0CE99 70 aa-1.82□□□□□ -2.7
LOC1YFR001W THO2P53552 1597 aaKnown RBP-1.83□□□□□ -2.7
LOC1YFR001W RPS30AP0CX33 63 aaKnown RBP-1.83□□□□□ -2.7
LOC1YFR001W RPS30BP0CX34 63 aaKnown RBP-1.83□□□□□ -2.7
LOC1YFR001W ERI1P62651 68 aaKnown RBP-1.83□□□□□ -2.7
LOC1YFR001W FKS3Q04952 1785 aa-1.85□□□□□ -2.7
LOC1YFR001W SNQ2P32568 1501 aaKnown RBP-1.86□□□□□ -2.71
LOC1YFR001W PDR12Q02785 1511 aa-1.86□□□□□ -2.71
LOC1YFR001W YOL131WQ08270 108 aa-1.87□□□□□ -2.71
LOC1YFR001W IQG1Q12280 1495 aa-1.88□□□□□ -2.71
LOC1YFR001W TRA1P38811 3744 aa-1.88□□□□□ -2.71
LOC1YFR001W RPL29P05747 59 aaPredicted RBP-1.89□□□□□ -2.71
LOC1YFR001W ARO1P08566 1588 aaKnown RBP-1.89□□□□□ -2.71
LOC1YFR001W YDR034C-AP0C289 58 aa-1.9□□□□□ -2.71
LOC1YFR001W PDR15Q04182 1529 aaKnown RBP-1.91□□□□□ -2.71
LOC1YFR001W IRA1P18963 3092 aa-1.92□□□□□ -2.72
LOC1YFR001W DNF2Q12675 1612 aa-1.93□□□□□ -2.72
LOC1YFR001W ESP1Q03018 1630 aa-1.94□□□□□ -2.72
LOC1YFR001W YOR316C-AQ3E806 69 aa-1.94□□□□□ -2.72
LOC1YFR001W YOL166W-AQ8TGJ1 51 aa-1.94□□□□□ -2.72
LOC1YFR001W IRA2P19158 3079 aa-1.94□□□□□ -2.72
LOC1YFR001W UFD4P33202 1483 aa-1.96□□□□□ -2.72
Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms