RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C POC4Q12245 148 aaPredicted RBP-2.46□□□□□ -2.8
CSN9YDR179C MDN1Q12019 4910 aaKnown RBP-2.48□□□□□ -2.81
CSN9YDR179C LSM2P38203 95 aaKnown RBP-2.48□□□□□ -2.81
CSN9YDR179C YDR042CQ03205 200 aa-2.48□□□□□ -2.81
CSN9YDR179C DYN1P36022 4092 aa-2.48□□□□□ -2.81
CSN9YDR179C SMC4Q12267 1418 aa-2.49□□□□□ -2.81
CSN9YDR179C SCP1Q08873 200 aa-2.49□□□□□ -2.81
CSN9YDR179C MEC1P38111 2368 aa-2.49□□□□□ -2.81
CSN9YDR179C GCN1P33892 2672 aaKnown RBP-2.5□□□□□ -2.81
CSN9YDR179C YIL156W-BQ2V2P4 73 aa-2.54□□□□□ -2.82
CSN9YDR179C RPA190P10964 1664 aaKnown RBP-2.54□□□□□ -2.82
CSN9YDR179C GDB1Q06625 1536 aa-2.55□□□□□ -2.82
CSN9YDR179C YER137CP40083 148 aaKnown RBP-2.56□□□□□ -2.82
CSN9YDR179C YLR146W-AQ2V2P1 62 aa-2.58□□□□□ -2.82
CSN9YDR179C IRC20Q06554 1556 aa-2.58□□□□□ -2.82
CSN9YDR179C YOR105WQ08504 108 aa-2.6□□□□□ -2.83
CSN9YDR179C YOR343CQ12484 108 aa-2.6□□□□□ -2.83
CSN9YDR179C YOR394C-AQ8TGJ0 55 aa-2.6□□□□□ -2.83
CSN9YDR179C COA2Q3E823 68 aa-2.64□□□□□ -2.83
CSN9YDR179C UTP10P42945 1769 aaKnown RBP-2.65□□□□□ -2.83
CSN9YDR179C YBR200W-AQ3E755 54 aa-2.66□□□□□ -2.84
CSN9YDR179C SWR1Q05471 1514 aa-2.67□□□□□ -2.84
CSN9YDR179C APC1P53886 1748 aa-2.67□□□□□ -2.84
CSN9YDR179C YPL225WQ08971 146 aaKnown RBP-2.68□□□□□ -2.84
CSN9YDR179C YDR524C-BQ3E6R4 66 aa-2.68□□□□□ -2.84
CSN9YDR179C YDL022C-AP0C5L6 82 aa-2.69□□□□□ -2.84
CSN9YDR179C YOR011W-AQ3E807 68 aa-2.69□□□□□ -2.84
CSN9YDR179C KOG1P38873 1557 aa-2.71□□□□□ -2.84
CSN9YDR179C ATP17Q06405 101 aa-2.72□□□□□ -2.84
CSN9YDR179C YKL065W-AQ2V2P2 73 aa-2.72□□□□□ -2.84
CSN9YDR179C RPO21P04050 1733 aaKnown RBP-2.73□□□□□ -2.85
CSN9YDR179C YLL006W-AQ3E814 58 aa-2.73□□□□□ -2.85
CSN9YDR179C YOR314WQ12506 109 aa-2.74□□□□□ -2.85
CSN9YDR179C YCL001W-BQ96VH2 84 aa-2.74□□□□□ -2.85
CSN9YDR179C MDS3P53094 1487 aa-2.76□□□□□ -2.85
CSN9YDR179C TY3B-GQ99315 1547 aa-2.76□□□□□ -2.85
CSN9YDR179C YDR119W-AQ2V2P9 66 aa-2.77□□□□□ -2.85
CSN9YDR179C YGL258W-AQ3E740 77 aa-2.77□□□□□ -2.85
CSN9YDR179C YBL039W-BP0C268 59 aa-2.78□□□□□ -2.85
CSN9YDR179C YMR175W-AQ3E766 64 aa-2.8□□□□□ -2.86
CSN9YDR179C YMR082CQ04276 118 aa-2.85□□□□□ -2.87
CSN9YDR179C SIN3P22579 1536 aa-2.87□□□□□ -2.87
CSN9YDR179C PDR10P51533 1564 aa-2.87□□□□□ -2.87
CSN9YDR179C RPS27BP38711 82 aa-2.88□□□□□ -2.87
CSN9YDR179C ZEO1Q08245 113 aa-2.9□□□□□ -2.87
CSN9YDR179C YPR145C-AQ2V2P0 78 aa-2.91□□□□□ -2.88
CSN9YDR179C HAP1P0CE41 1502 aa-2.92□□□□□ -2.88
CSN9YDR179C YGR146C-AQ8TGT9 53 aa-2.92□□□□□ -2.88
CSN9YDR179C QCR9P22289 66 aa-2.93□□□□□ -2.88
CSN9YDR179C VPS15P22219 1454 aa-2.96□□□□□ -2.88
CSN9YDR179C YOR072W-BQ3E832 53 aa-2.96□□□□□ -2.88
CSN9YDR179C YOR032W-AQ8TGS1 66 aa-2.96□□□□□ -2.88
CSN9YDR179C YGR121W-AQ3E816 71 aa-2.98□□□□□ -2.89
CSN9YDR179C YCR075W-AQ3E830 75 aa-2.99□□□□□ -2.89
CSN9YDR179C SWM2P40342 146 aa-3.01□□□□□ -2.89
CSN9YDR179C YGR035W-AQ45U48 73 aa-3.01□□□□□ -2.89
CSN9YDR179C MMS22Q06164 1454 aa-3.03□□□□□ -2.89
CSN9YDR179C PAU7P39545 55 aa-3.03□□□□□ -2.89
CSN9YDR179C YBR230W-AQ3E762 66 aa-3.03□□□□□ -2.89
CSN9YDR179C SSS1P35179 80 aa-3.05□□□□□ -2.9
CSN9YDR179C HUB1Q6Q546 73 aa-3.06□□□□□ -2.9
CSN9YDR179C CWP2P43497 92 aa-3.1□□□□□ -2.91
CSN9YDR179C LTE1P07866 1435 aa-3.13□□□□□ -2.91
CSN9YDR179C YGL194C-AQ2V2P6 80 aa-3.15□□□□□ -2.91
CSN9YDR179C YSP2Q06681 1438 aa-3.16□□□□□ -2.92
CSN9YDR179C TIM12P32830 109 aa-3.23□□□□□ -2.93
CSN9YDR179C SPI1P40092 148 aa-3.23□□□□□ -2.93
CSN9YDR179C Q0017Q9ZZX8 53 aa-3.25□□□□□ -2.93
CSN9YDR179C FIG2P25653 1609 aa-3.26□□□□□ -2.93
CSN9YDR179C YOR192C-CQ3E736 78 aa-3.3□□□□□ -2.94
CSN9YDR179C FKS3Q04952 1785 aa-3.3□□□□□ -2.94
CSN9YDR179C MLP1Q02455 1875 aaKnown RBP-3.32□□□□□ -2.94
CSN9YDR179C ERI1P62651 68 aaKnown RBP-3.34□□□□□ -2.94
CSN9YDR179C CUP1-1P0CX80 61 aa-3.35□□□□□ -2.95
CSN9YDR179C CUP1-2P0CX81 61 aa-3.35□□□□□ -2.95
CSN9YDR179C DNF1P32660 1571 aa-3.35□□□□□ -2.95
CSN9YDR179C RPS30AP0CX33 63 aaKnown RBP-3.38□□□□□ -2.95
CSN9YDR179C RPS30BP0CX34 63 aaKnown RBP-3.38□□□□□ -2.95
CSN9YDR179C ESP1Q03018 1630 aa-3.38□□□□□ -2.95
CSN9YDR179C YLR157W-DP0CE99 70 aa-3.39□□□□□ -2.95
CSN9YDR179C ARO1P08566 1588 aaKnown RBP-3.41□□□□□ -2.96
CSN9YDR179C PDR12Q02785 1511 aa-3.41□□□□□ -2.96
CSN9YDR179C IQG1Q12280 1495 aa-3.45□□□□□ -2.96
CSN9YDR179C ESC1Q03661 1658 aaKnown RBP-3.46□□□□□ -2.96
CSN9YDR179C THO2P53552 1597 aaKnown RBP-3.48□□□□□ -2.97
CSN9YDR179C YOL131WQ08270 108 aa-3.49□□□□□ -2.97
CSN9YDR179C DNF2Q12675 1612 aa-3.5□□□□□ -2.97
CSN9YDR179C SNQ2P32568 1501 aaKnown RBP-3.5□□□□□ -2.97
CSN9YDR179C YML054C-AQ3E809 52 aa-3.52□□□□□ -2.97
CSN9YDR179C PDR15Q04182 1529 aaKnown RBP-3.54□□□□□ -2.98
CSN9YDR179C IML1P47170 1584 aa-3.54□□□□□ -2.98
CSN9YDR179C UFD4P33202 1483 aa-3.55□□□□□ -2.98
CSN9YDR179C BCK1Q01389 1478 aa-3.58□□□□□ -2.98
CSN9YDR179C RRP5Q05022 1729 aaKnown RBP-3.61□□□□□ -2.99
CSN9YDR179C YOL166W-AQ8TGJ1 51 aa-3.62□□□□□ -2.99
CSN9YDR179C CSF1Q12150 2958 aa-3.62□□□□□ -2.99
CSN9YDR179C YSY6P38374 65 aa-3.63□□□□□ -2.99
CSN9YDR179C YFL041W-AQ3E817 63 aa-3.66□□□□□ -3
CSN9YDR179C TY1B-DR4Q07793 1604 aa-3.66□□□□□ -3
CSN9YDR179C YOR093CQ12275 1648 aa-3.67□□□□□ -3
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms