RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W TY1B-MR2Q04670 1755 aaKnown RBP0.71□□□□□ -2.3
SHR3YDL212W TY1B-NL1Q12112 1755 aa0.71□□□□□ -2.3
SHR3YDL212W TY1B-GR1Q12141 1755 aa0.71□□□□□ -2.3
SHR3YDL212W TY1B-GR3Q12316 1755 aa0.71□□□□□ -2.3
SHR3YDL212W TY1B-PLQ12414 1755 aaKnown RBP0.71□□□□□ -2.3
SHR3YDL212W TY1B-ORQ92393 1755 aa0.71□□□□□ -2.3
SHR3YDL212W PAU7P39545 55 aa0.71□□□□□ -2.3
SHR3YDL212W IRA2P19158 3079 aa0.71□□□□□ -2.3
SHR3YDL212W TEL1P38110 2787 aa0.71□□□□□ -2.3
SHR3YDL212W TCB3Q03640 1545 aaKnown RBP0.7□□□□□ -2.3
SHR3YDL212W SCC2Q04002 1493 aa0.7□□□□□ -2.3
SHR3YDL212W YBR016WP38216 128 aa0.7□□□□□ -2.3
SHR3YDL212W EDC1P53080 175 aaPredicted RBP0.7□□□□□ -2.3
SHR3YDL212W ERI1P62651 68 aaKnown RBP0.7□□□□□ -2.3
SHR3YDL212W YOR032W-AQ8TGS1 66 aa0.7□□□□□ -2.3
SHR3YDL212W SNF2P22082 1703 aa0.69□□□□□ -2.3
SHR3YDL212W RPS29BP41058 56 aaKnown RBP0.69□□□□□ -2.3
SHR3YDL212W YDR246W-AQ3E763 66 aa0.69□□□□□ -2.3
SHR3YDL212W YKL018C-AQ3E7A7 99 aa0.69□□□□□ -2.3
SHR3YDL212W TY1B-DR5P0C2I2 1755 aa0.69□□□□□ -2.3
SHR3YDL212W TY1B-PR1P0C2I9 1755 aaKnown RBP0.69□□□□□ -2.3
SHR3YDL212W TY1B-ER2Q03619 1755 aa0.69□□□□□ -2.3
SHR3YDL212W TY1B-DR1Q03855 1755 aa0.69□□□□□ -2.3
SHR3YDL212W TY1B-ML1Q04711 1755 aaKnown RBP0.69□□□□□ -2.3
SHR3YDL212W TY1B-LR1Q12088 1755 aaKnown RBP0.69□□□□□ -2.3
SHR3YDL212W TY1B-GR2Q12269 1755 aa0.69□□□□□ -2.3
SHR3YDL212W TY1B-DR3Q99231 1755 aa0.68□□□□□ -2.3
SHR3YDL212W YOL131WQ08270 108 aa0.67□□□□□ -2.3
SHR3YDL212W TY2B-LR1P0C2J3 1770 aa0.67□□□□□ -2.3
SHR3YDL212W TY2B-FP0CX63 1770 aa0.67□□□□□ -2.3
SHR3YDL212W TY2B-GR2P0CX64 1770 aa0.67□□□□□ -2.3
SHR3YDL212W TY2B-DR2Q03494 1770 aa0.67□□□□□ -2.3
SHR3YDL212W TY2B-OR1Q12113 1770 aa0.67□□□□□ -2.3
SHR3YDL212W TY2B-BQ12491 1770 aa0.67□□□□□ -2.3
SHR3YDL212W TY2B-OR2Q12501 1770 aa0.67□□□□□ -2.3
SHR3YDL212W VPS15P22219 1454 aa0.67□□□□□ -2.3
SHR3YDL212W PMD1P32634 1753 aa0.66□□□□□ -2.3
SHR3YDL212W YFR009W-AP0C5M9 85 aa0.66□□□□□ -2.3
SHR3YDL212W RPO31P04051 1460 aa0.66□□□□□ -2.3
SHR3YDL212W TOR2P32600 2474 aaKnown RBP0.65□□□□□ -2.3
SHR3YDL212W TY2B-DR3Q07791 1770 aaKnown RBP0.65□□□□□ -2.3
SHR3YDL212W IRA1P18963 3092 aa0.65□□□□□ -2.31
SHR3YDL212W YFR010W-AP0C5N0 62 aa0.65□□□□□ -2.31
SHR3YDL212W YSY6P38374 65 aa0.65□□□□□ -2.31
SHR3YDL212W YDR182W-AQ3E796 67 aa0.65□□□□□ -2.31
SHR3YDL212W TAO3P40468 2376 aa0.65□□□□□ -2.31
SHR3YDL212W TY1B-JR1P47098 1755 aa0.65□□□□□ -2.31
SHR3YDL212W TY1B-ML2Q03434 1755 aaKnown RBP0.65□□□□□ -2.31
SHR3YDL212W TY1B-ER1Q03612 1755 aa0.65□□□□□ -2.31
SHR3YDL212W TY1B-OLQ12273 1755 aa0.65□□□□□ -2.31
SHR3YDL212W HKR1P41809 1802 aa0.64□□□□□ -2.31
SHR3YDL212W YIL102C-AQ2V2P5 75 aa0.64□□□□□ -2.31
SHR3YDL212W HUB1Q6Q546 73 aa0.64□□□□□ -2.31
SHR3YDL212W DNF1P32660 1571 aa0.63□□□□□ -2.31
SHR3YDL212W IML1P47170 1584 aa0.63□□□□□ -2.31
SHR3YDL212W MYO4P32492 1471 aa0.63□□□□□ -2.31
SHR3YDL212W IQG1Q12280 1495 aa0.63□□□□□ -2.31
SHR3YDL212W YGR025WP53216 100 aa0.63□□□□□ -2.31
SHR3YDL212W YBR200W-AQ3E755 54 aa0.63□□□□□ -2.31
SHR3YDL212W VMA9Q3E7B6 73 aa0.63□□□□□ -2.31
SHR3YDL212W YLR146W-AQ2V2P1 62 aa0.62□□□□□ -2.31
SHR3YDL212W YOR011W-AQ3E807 68 aa0.62□□□□□ -2.31
SHR3YDL212W YIL134C-AQ45U18 67 aa0.62□□□□□ -2.31
SHR3YDL212W ARO1P08566 1588 aaKnown RBP0.62□□□□□ -2.31
SHR3YDL212W APC1P53886 1748 aa0.61□□□□□ -2.31
SHR3YDL212W YBL039W-BP0C268 59 aa0.61□□□□□ -2.31
SHR3YDL212W RPS30AP0CX33 63 aaKnown RBP0.6□□□□□ -2.31
SHR3YDL212W RPS30BP0CX34 63 aaKnown RBP0.6□□□□□ -2.31
SHR3YDL212W RPS27AP35997 82 aaKnown RBP0.6□□□□□ -2.31
SHR3YDL212W SMC4Q12267 1418 aa0.6□□□□□ -2.31
SHR3YDL212W DNF2Q12675 1612 aa0.6□□□□□ -2.31
SHR3YDL212W DYN1P36022 4092 aa0.59□□□□□ -2.31
SHR3YDL212W YBL044WP38194 122 aa0.59□□□□□ -2.31
SHR3YDL212W YOR394C-AQ8TGJ0 55 aa0.59□□□□□ -2.31
SHR3YDL212W BCK1Q01389 1478 aa0.59□□□□□ -2.32
SHR3YDL212W PDR12Q02785 1511 aa0.59□□□□□ -2.32
SHR3YDL212W RRP5Q05022 1729 aaKnown RBP0.58□□□□□ -2.32
SHR3YDL212W YOL166W-AQ8TGJ1 51 aa0.58□□□□□ -2.32
SHR3YDL212W FKS3Q04952 1785 aa0.57□□□□□ -2.32
SHR3YDL212W MMS1Q06211 1407 aa0.56□□□□□ -2.32
SHR3YDL212W TY3B-GQ99315 1547 aa0.56□□□□□ -2.32
SHR3YDL212W OLI1P61829 76 aa0.56□□□□□ -2.32
SHR3YDL212W IRC20Q06554 1556 aa0.55□□□□□ -2.32
SHR3YDL212W SEN1Q00416 2231 aaKnown RBP0.55□□□□□ -2.32
SHR3YDL212W KOG1P38873 1557 aa0.54□□□□□ -2.32
SHR3YDL212W YMR001C-AQ8TGS9 76 aa0.53□□□□□ -2.32
SHR3YDL212W HAP1P0CE41 1502 aa0.51□□□□□ -2.33
SHR3YDL212W YKL023C-AQ2V2P3 75 aa0.51□□□□□ -2.33
SHR3YDL212W VMR1P38735 1592 aa0.5□□□□□ -2.33
SHR3YDL212W PDR15Q04182 1529 aaKnown RBP0.5□□□□□ -2.33
SHR3YDL212W YCR108CQ3E819 63 aa0.5□□□□□ -2.33
SHR3YDL212W YLR157W-DP0CE99 70 aa0.49□□□□□ -2.33
SHR3YDL212W RPO21P04050 1733 aaKnown RBP0.48□□□□□ -2.33
SHR3YDL212W YBR230W-AQ3E762 66 aa0.48□□□□□ -2.33
SHR3YDL212W PDR5P33302 1511 aaKnown RBP0.48□□□□□ -2.33
SHR3YDL212W YCF1P39109 1515 aaKnown RBP0.48□□□□□ -2.33
SHR3YDL212W VTH1P40438 1549 aa0.48□□□□□ -2.33
SHR3YDL212W VTH2P40890 1549 aa0.48□□□□□ -2.33
SHR3YDL212W YBR056W-AI2HB52 66 aa0.47□□□□□ -2.33
SHR3YDL212W RPS27BP38711 82 aa0.47□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 90.5 ms