RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 WDR60Q8WVS4 1066 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 TRAPPC12Q8WVT3 735 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 JDP2Q8WYK2 163 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 TRIM56Q9BRZ2 755 aaKnown RBP14.42□□□□□ -0.1
PHGDH-233ENST00000642021 R3HDMLQ9H3Y0 253 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 DCLRE1BQ9H816 532 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 USP29Q9HBJ7 922 aa14.42□□□□□ -0.1
PHGDH-233ENST00000642021 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.42□□□□□ -0.1
PHGDH-233ENST00000642021 CORO1CQ9ULV4 474 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-233ENST00000642021 MICAL2O94851 1124 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 PDHA1P08559 390 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 LINGO3P0C6S8 592 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 PROZP22891 400 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 PCK1P35558 622 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 SERPINB4P48594 390 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 CCNHP51946 323 aaPredicted RBP14.41□□□□□ -0.1
PHGDH-233ENST00000642021 ROR1Q01973 937 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 ZBTB16Q05516 673 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 NOMO1Q15155 1222 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 DPH6Q7L8W6 267 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 ALYREFQ86V81 257 aaKnown RBP14.41□□□□□ -0.1
PHGDH-233ENST00000642021 C1orf127Q8N9H9 656 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 NRG4Q8WWG1 115 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 MCRS1Q96EZ8 462 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 CFAP36Q96G28 342 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 OSBPL1AQ9BXW6 950 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 IKBKGQ9Y6K9 419 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 GYG2O15488 501 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 B4GALT4O60513 344 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 UGT1A9O60656 530 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 DNAJC6O75061 913 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 GRAP2O75791 330 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 KRT36O76013 467 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 RNF8O76064 485 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 ENDOD1O94919 500 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 TNNC2P02585 160 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 NFICP08651 508 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 ATP6V1C1P21283 382 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 GPD2P43304 727 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 FAM102AQ5T9C2 384 aaPredicted RBP14.41□□□□□ -0.1
PHGDH-233ENST00000642021 IER5Q5VY09 327 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 PPM1NQ8N819 430 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 DNERQ8NFT8 737 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 ITFG2Q969R8 447 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 FAF2Q96CS3 445 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 ANKRD36BP1Q96IX9 119 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 ANKRD27Q96NW4 1050 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 SRPK1Q96SB4 655 aaKnown RBP14.41□□□□□ -0.1
PHGDH-233ENST00000642021 BCO2Q9BYV7 579 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 NMUR2Q9GZQ4 415 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 MINDY3Q9H8M7 445 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 UGT1A7Q9HAW7 530 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 UGT1A10Q9HAW8 530 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 UGT1A8Q9HAW9 530 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 RAB6BQ9NRW1 208 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 MTO1Q9Y2Z2 717 aaKnown RBP14.41□□□□□ -0.1
PHGDH-233ENST00000642021 LCTP09848 1927 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 PHIPQ8WWQ0 1821 aa14.41□□□□□ -0.1
PHGDH-233ENST00000642021 SOWAHBA6NEL2 793 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 TRIM49D1C9J1S8 452 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 CYB561D2O14569 222 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 MED7O43513 233 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 CSDE1O75534 798 aaKnown RBP14.4□□□□□ -0.1
PHGDH-233ENST00000642021 TGDSO95455 350 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 IQCF3P0C7M6 154 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 STIP1P31948 543 aaKnown RBP14.4□□□□□ -0.1
PHGDH-233ENST00000642021 CPA2P48052 419 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 GMPSP49915 693 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-233ENST00000642021 TUBP50607 506 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 PTPN11Q06124 597 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-233ENST00000642021 CDO1Q16878 200 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 HSDL1Q3SXM5 330 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 ZNF667Q5HYK9 610 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 MPZL3Q6UWV2 235 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 CTAGE3PQ8IX95 158 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 SH3TC2Q8TF17 1288 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 FBXO41Q8TF61 875 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 SEPT1Q8WYJ6 367 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 RSAD1Q9HA92 442 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 ARHGEF4Q9NR80 690 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 SMYD2Q9NRG4 433 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 HOXC10Q9NYD6 342 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 RPL26L1Q9UNX3 145 aaKnown RBP14.4□□□□□ -0.1
PHGDH-233ENST00000642021 TTLL3Q9Y4R7 772 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 DPPA5A6NC42 116 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 C19orf81C9J6K1 198 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 H7C0C1 242 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 INO80B-WBP1J3KQ70 363 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 LIN7AO14910 233 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-233ENST00000642021 LUC7L3O95232 432 aaKnown RBP14.4□□□□□ -0.1
PHGDH-233ENST00000642021 TSHRP16473 764 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 IL4RP24394 825 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 ATP5OP48047 213 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 YWHAZP63104 245 aaKnown RBP14.4□□□□□ -0.1
PHGDH-233ENST00000642021 RCN1Q15293 331 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 ATF7IP2Q5U623 682 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 DCAF15Q66K64 600 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 TSHZ1Q6ZSZ6 1077 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 FBXO27Q8NI29 283 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 DNAJC9Q8WXX5 260 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms