RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ARHGEF2Q92974 986 aaKnown RBP15.8■□□□□ 0.12
TRIM3-215ENST00000639856 C9orf72Q96LT7 481 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 ZNF560Q96MR9 790 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 TMEM121Q9BTD3 319 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 FRMD8P1Q9BZ68 369 aaPredicted RBP15.8■□□□□ 0.12
TRIM3-215ENST00000639856 TRPV6Q9H1D0 765 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 PCDH9Q9HC56 1237 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 CHST12Q9NRB3 414 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 MIOSQ9NXC5 875 aa15.8■□□□□ 0.12
TRIM3-215ENST00000639856 TPX2Q9ULW0 747 aaKnown RBP15.8■□□□□ 0.12
TRIM3-215ENST00000639856 SGK1O00141 431 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 CST8O60676 142 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 KIAA0754O94854 1291 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 PDGFRBP09619 1106 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 LMO2P25791 158 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 MAGEA4P43358 317 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 TAF6P49848 677 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 PTK7Q13308 1070 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 MORF4L2Q15014 288 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 FAM102AQ5T9C2 384 aaPredicted RBP15.79■□□□□ 0.12
TRIM3-215ENST00000639856 LCLAT1Q6UWP7 414 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 C6orf89Q6UWU4 347 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 CPLX4Q7Z7G2 160 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 CMASQ8NFW8 434 aaPredicted RBP15.79■□□□□ 0.12
TRIM3-215ENST00000639856 ACTL9Q8TC94 416 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 ZNF317Q96PQ6 595 aaPredicted RBP15.79■□□□□ 0.12
TRIM3-215ENST00000639856 CCDC134Q9H6E4 229 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 A8MXQ7 604 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 NDC80O14777 642 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 FKTNO75072 461 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 CABYRO75952 493 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 ABHD2P08910 425 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 DRD4P21917 467 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 MIPP30301 263 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 LILRA4P59901 499 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 DYNLT1P63172 113 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 OTUD4Q01804 1114 aaKnown RBP15.79■□□□□ 0.12
TRIM3-215ENST00000639856 STAT4Q14765 748 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 AGMOQ6ZNB7 445 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 GLT1D1Q96MS3 346 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 TSPAN18Q96SJ8 248 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 CCDC77Q9BR77 488 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 ASNSD1Q9NWL6 643 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 GDAP2Q9NXN4 497 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 CTNNAL1Q9UBT7 734 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 PCSK1NQ9UHG2 260 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 USP18Q9UMW8 372 aa15.79■□□□□ 0.12
TRIM3-215ENST00000639856 ARL5CA6NH57 179 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 CDH16O75309 829 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 GNRH1P01148 92 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 PECAM1P16284 738 aaPredicted RBP15.78■□□□□ 0.12
TRIM3-215ENST00000639856 PCK1P35558 622 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 PNPLA4P41247 253 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 RGS7P49802 495 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 ZNF143P52747 638 aaPredicted RBP15.78■□□□□ 0.12
TRIM3-215ENST00000639856 STILQ15468 1287 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 RNASEH2BQ5TBB1 312 aaKnown RBP15.78■□□□□ 0.12
TRIM3-215ENST00000639856 TTC30AQ86WT1 665 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 KCTD6Q8NC69 237 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 RNF169Q8NCN4 708 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 SEC16BQ96JE7 1060 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 MIS12Q9H081 205 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 HMX1Q9NP08 348 aaPredicted RBP15.78■□□□□ 0.12
TRIM3-215ENST00000639856 SAE1Q9UBE0 346 aaPredicted RBP15.78■□□□□ 0.12
TRIM3-215ENST00000639856 LGALS13Q9UHV8 139 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 PTCH2Q9Y6C5 1203 aa15.78■□□□□ 0.12
TRIM3-215ENST00000639856 A0A1W2PQ45 241 aaPredicted RBP15.77■□□□□ 0.12
TRIM3-215ENST00000639856 A0A1W2PQY0 241 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 TRUB2O95900 331 aaKnown RBP15.77■□□□□ 0.12
TRIM3-215ENST00000639856 IFNB1P01574 187 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 RPLP2P05387 115 aaKnown RBP15.77■□□□□ 0.12
TRIM3-215ENST00000639856 CD48P09326 243 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 LRPAP1P30533 357 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 GRK4P32298 578 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 SCNN1GP51170 649 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 CCDC142Q17RM4 750 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 SV2CQ496J9 727 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 GKAP1Q5VSY0 366 aaPredicted RBP15.77■□□□□ 0.12
TRIM3-215ENST00000639856 TADA2BQ86TJ2 420 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 OTUD6BQ8N6M0 293 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 APPL2Q8NEU8 664 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 PPM1EQ8WY54 764 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 PIWIL1Q96J94 861 aaKnown RBP15.77■□□□□ 0.12
TRIM3-215ENST00000639856 CFAP57Q96MR6 1250 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 TTC25Q96NG3 672 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 CNPY3Q9BT09 278 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 SAYSD1Q9NPB0 183 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 SHOC2Q9UQ13 582 aa15.77■□□□□ 0.12
TRIM3-215ENST00000639856 MOXD2PA6NHM9 499 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 E5RJQ4 531 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 CCDC130P13994 396 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 GPD1P21695 349 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 GNL1P36915 607 aaPredicted RBP15.77■□□□□ 0.11
TRIM3-215ENST00000639856 IFT88Q13099 833 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 DSC3Q14574 896 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 PKDCCQ504Y2 493 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 PMF1Q6P1K2 205 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 LIMS2Q7Z4I7 341 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 UNC93AQ86WB7 457 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 OSTM1Q86WC4 334 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms