RNA–Protein interactions for RNA: ENST00000638589.1

HNRNPU-215, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 2

Gene HNRNPU, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-215	ENST00000638589	ARHGAP15	Q53QZ3	475 aa		4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	THEMIS2	Q5TEJ8	643 aa		4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	DARS2	Q6PI48	645 aa	Known RBP	4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	LCORL	Q8N3X6	602 aa		4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	PAF1	Q8N7H5	531 aa		4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	MYRIP	Q8NFW9	859 aa		4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	PJA1	Q8NG27	643 aa		4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	R3HDM4	Q96D70	268 aa		4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	SIN3A	Q96ST3	1273 aa		4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	NAP1L4	Q99733	375 aa	Known RBP	4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	PCED1A	Q9H1Q7	454 aa		4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	PRDM11	Q9NQV5	511 aa		4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	CNOT11	Q9UKZ1	510 aa	Known RBP	4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	MYRF	Q9Y2G1	1151 aa		4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	PCDHGB2	Q9Y5G2	931 aa		4.09	□□□□□ -1.76
HNRNPU-215	ENST00000638589	CFAP65	Q6ZU64	1925 aa	Known RBP	4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	KDM5A	P29375	1690 aa	Known RBP	4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	NPAT	Q14207	1427 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	UHRF1BP1	Q6BDS2	1440 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	SPATA31E1	Q6ZUB1	1445 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	TONSL	Q96HA7	1378 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589		A0A087WWL8	130 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	RHPN2P1	A8MT19	583 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	AP4M1	O00189	453 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	TIMM44	O43615	452 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	TBC1D4	O60343	1298 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	RNASEH2A	O75792	299 aa	Known RBP	4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	RASAL1	O95294	804 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	MAK	P20794	623 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	ABCB4	P21439	1286 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	PTGS2	P35354	604 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	COPB2	P35606	906 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	SEC24C	P53992	1094 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	HTRA4	P83105	476 aa	Predicted RBP	4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	PMS2P11	Q13670	270 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	AWAT1	Q58HT5	328 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	CACHD1	Q5VU97	1274 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	ZNF783	Q6ZMS7	281 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	CLNK	Q7Z7G1	428 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	OR6B3	Q8NGW1	331 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	ATG4A	Q8WYN0	398 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	APIP	Q96GX9	242 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	FBXL20	Q96IG2	436 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	CHST8	Q9H2A9	424 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	ZNF287	Q9HBT7	754 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	ADAM21	Q9UKJ8	722 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	NDRG4	Q9ULP0	352 aa	Known RBP	4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	FRMD4B	Q9Y2L6	1034 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	NOS1	P29475	1434 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	CNTLN	Q9NXG0	1405 aa		4.08	□□□□□ -1.76
HNRNPU-215	ENST00000638589	ERC2	O15083	957 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	FPR3	P25089	353 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	ITPKB	P27987	946 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	PTDSS1	P48651	473 aa	Known RBP	4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	RPS7	P62081	194 aa	Known RBP	4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	SIM1	P81133	766 aa	Predicted RBP	4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	ZBED6	P86452	979 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	POU5F1	Q01860	360 aa	Known RBP	4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	CALD1	Q05682	793 aa	Known RBP	4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	TREML2	Q5T2D2	321 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	FAM160B1	Q5W0V3	765 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	SLC9A4	Q6AI14	798 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	FCRL6	Q6DN72	434 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	USP49	Q70CQ1	688 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	ARHGEF19	Q8IW93	802 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	DNAJB14	Q8TBM8	379 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	RFK	Q969G6	155 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	PRR11	Q96HE9	360 aa	Predicted RBP	4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	KRTAP4-2	Q9BYR5	136 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	AMBRA1	Q9C0C7	1298 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	KIAA1586	Q9HCI6	787 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	ZDHHC8	Q9ULC8	765 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	ASAP1	Q9ULH1	1129 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	TMX2	Q9Y320	296 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	UGGT1	Q9NYU2	1555 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	RALGAPB	Q86X10	1494 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	CCDC144A	A2RUR9	1427 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	IQGAP1	P46940	1657 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	MYO1C	O00159	1063 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	GOLIM4	O00461	696 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	IL6R	P08887	468 aa	Predicted RBP	4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	NR2F6	P10588	404 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	TSHR	P16473	764 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	EN2	P19622	333 aa	Predicted RBP	4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	SCP2	P22307	547 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	PRKAG1	P54619	331 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	IQCB1	Q15051	598 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	TBCC	Q15814	346 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	GRAMD1B	Q3KR37	738 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	FAM83B	Q5T0W9	1011 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	EMC10	Q5UCC4	262 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	KAZN	Q674X7	775 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	SP5	Q6BEB4	398 aa	Predicted RBP	4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	OLFML1	Q6UWY5	402 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	MICALCL	Q6ZW33	695 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	PEG10	Q86TG7	708 aa	Known RBP	4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	SYNE4	Q8N205	404 aa		4.07	□□□□□ -1.76
HNRNPU-215	ENST00000638589	SAMD3	Q8N6K7	520 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms