RNA–Protein interactions for RNA: ENST00000638454.1

PRAMEF13-202, Transcript of PRAME family member 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRAMEF13, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13-202ENST00000638454 SLC6A3Q01959 620 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 USP4Q13107 963 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 LRRC38Q5VT99 294 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 PSRC1Q6PGN9 363 aaPredicted RBP11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 ANKS3Q6ZW76 656 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 ARCQ7LC44 396 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 FAM35AQ86V20 835 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 CMTR2Q8IYT2 770 aaKnown RBP11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 KCTD13Q8WZ19 329 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 RABGGTAQ92696 567 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 TOP1MTQ969P6 601 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 FUBP3Q96I24 572 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 PSMB7Q99436 277 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 PNPLA8Q9NP80 782 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 DMAP1Q9NPF5 467 aaPredicted RBP11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 METTL5Q9NRN9 209 aaKnown RBP11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 TMEM51Q9NW97 253 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 ARGLU1Q9NWB6 273 aaPredicted RBP11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 DDX56Q9NY93 547 aaKnown RBP11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 CACNG4Q9UBN1 327 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 PACSIN2Q9UNF0 486 aaPredicted RBP11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 PCDHB11Q9Y5F2 797 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 PCDHA3Q9Y5H8 950 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 MICAL3Q7RTP6 2002 aa11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 KIAA0100Q14667 2235 aaKnown RBP11.14□□□□□ -0.63
PRAMEF13-202ENST00000638454 CCDC188H7C350 402 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 I3L4J1 428 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 HSF2BPO75031 334 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 SRGAP2O75044 1071 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 DGKIO75912 1065 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 GLI1P08151 1106 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 CSF2RAP15509 400 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 GPD1P21695 349 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 SDC4P31431 198 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 CXCR5P32302 372 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 PPM1AP35813 382 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 RGS7P49802 495 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 FPGSQ05932 587 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 SMC1AQ14683 1233 aaKnown RBP11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 CTXN3Q4LDR2 81 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 C2CD6Q53TS8 623 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 TEX35Q5T0J7 233 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 FAM171A1Q5VUB5 890 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 KIAA1841Q6NSI8 718 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 PMF1Q6P1K2 205 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 FUT10Q6P4F1 479 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 FAM171BQ6P995 826 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 ZNF572Q7Z3I7 529 aaPredicted RBP11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 PHLDB2Q86SQ0 1253 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 CEP57Q86XR8 500 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 CREG2Q8IUH2 290 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 FUKQ8N0W3 1084 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 C2orf15Q8WU43 125 aaKnown RBP11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 MYLPFQ96A32 169 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 PCED1BQ96HM7 432 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 RBM41Q96IZ5 413 aaKnown RBP11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 ZNF558Q96NG5 402 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 RUNDC3BQ96NL0 473 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 YME1L1Q96TA2 773 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 CNPY3Q9BT09 278 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 GOLPH3Q9H4A6 298 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 CRTAC1Q9NQ79 661 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 DNAJB4Q9UDY4 337 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 CHORDC1Q9UHD1 332 aaPredicted RBP11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 TTC7AQ9ULT0 858 aaPredicted RBP11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 STAP1Q9ULZ2 295 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 HTTP42858 3142 aa11.13□□□□□ -0.63
PRAMEF13-202ENST00000638454 TCRBV5S1A1TA0A578 114 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 TRIM43BA6NCK2 446 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 TADA3O75528 432 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 FGBP02675 491 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 GALTP07902 379 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 LCP1P13796 627 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 PDGFRAP16234 1089 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 RPL34P49207 117 aaKnown RBP11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 SLC11A1P49279 550 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 ZNF143P52747 638 aaPredicted RBP11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 BCAR1P56945 870 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 MAP3K7CLP57077 242 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 WDR5P61964 334 aaKnown RBP11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 BTG3Q14201 252 aaPredicted RBP11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 SCN5AQ14524 2016 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 LONRF2Q1L5Z9 754 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 USP41Q3LFD5 358 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 GLE1Q53GS7 698 aaKnown RBP11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 CC2D1AQ6P1N0 951 aaPredicted RBP11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 ADGRD1Q6QNK2 874 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 VSTM1Q6UX27 236 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 CLEC20AQ6ZU45 233 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 FAM183BPQ6ZVS7 135 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 SLC26A9Q7LBE3 791 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 POLNQ7Z5Q5 900 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 PIGZQ86VD9 579 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 CCDC50Q8IVM0 306 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 RASGEF1CQ8N431 466 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 GPR161Q8N6U8 529 aaKnown RBP11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 COG1Q8WTW3 980 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms