RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SATB1Q01826 763 aa17.73■□□□□ 0.43
CACNA1A-259ENST00000638114 GRSF1Q12849 480 aaKnown RBP eCLIP17.73■□□□□ 0.43
CACNA1A-259ENST00000638114 TMEM196Q5HYL7 178 aa17.73■□□□□ 0.43
CACNA1A-259ENST00000638114 MAMSTRQ6ZN01 415 aa17.73■□□□□ 0.43
CACNA1A-259ENST00000638114 CLEC20AQ6ZU45 233 aa17.73■□□□□ 0.43
CACNA1A-259ENST00000638114 CHFRQ96EP1 664 aa17.73■□□□□ 0.43
CACNA1A-259ENST00000638114 FAXDC2Q96IV6 333 aa17.73■□□□□ 0.43
CACNA1A-259ENST00000638114 LINC00597Q9H2U6 94 aa17.73■□□□□ 0.43
CACNA1A-259ENST00000638114 METTL14Q9HCE5 456 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-259ENST00000638114 CISHQ9NSE2 258 aa17.73■□□□□ 0.43
CACNA1A-259ENST00000638114 COMMD8Q9NX08 183 aa17.73■□□□□ 0.43
CACNA1A-259ENST00000638114 IL37Q9NZH6 218 aa17.73■□□□□ 0.43
CACNA1A-259ENST00000638114 TRDMT1O14717 391 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 COCHO43405 550 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 NFATC1O95644 943 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 NR1H3Q13133 447 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 MORC3Q14149 939 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 CCDC40Q4G0X9 1142 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 HECTD3Q5T447 861 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 FSTL4Q6MZW2 842 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 SYNPOQ8N3V7 929 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 TTC39CQ8N584 583 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 ZBTB44Q8NCP5 570 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 NELFBQ8WX92 580 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 TATDN2Q93075 761 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 SLC35C1Q96A29 364 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 EXOC4Q96A65 974 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 HEXIM2Q96MH2 286 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 CEP63Q96MT8 703 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 ARID3AQ99856 593 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 P2RY13Q9BPV8 354 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 FAM126AQ9BYI3 521 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 FBXO44Q9H4M3 255 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 CFAP97Q9P2B7 532 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 CTNND2Q9UQB3 1225 aa17.72■□□□□ 0.43
CACNA1A-259ENST00000638114 MYO16Q9Y6X6 1858 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 FAM92AA1XBS5 289 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 PPP1R3GB7ZBB8 358 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 SCAMP3O14828 347 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 TDGF1P13385 188 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 GALK1P51570 392 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 NRLP54845 237 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 UBE2HP62256 183 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 PPP1R26Q5T8A7 1209 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 NAIF1Q69YI7 327 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 TTI2Q6NXR4 508 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 GPRIN1Q7Z2K8 1008 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 FILIP1Q7Z7B0 1213 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 DDX42Q86XP3 938 aaKnown RBP eCLIP17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 NELL1Q92832 810 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 DUSP9Q99956 384 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 NACA2Q9H009 215 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 CCSER2Q9H7U1 834 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 FBRSL1Q9HCM7 1045 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 COQ4Q9Y3A0 265 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 WDR87Q6ZQQ6 2873 aa17.71■□□□□ 0.43
CACNA1A-259ENST00000638114 BICDL2A1A5D9 508 aa17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 SLC9A3R1O14745 358 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 EGFP01133 1207 aa17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 ZDHHC11BP0C7U3 371 aa17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 ACO1P21399 889 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 TUBP50607 506 aa17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 LRMPQ12912 555 aa17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 SNX30Q5VWJ9 437 aa17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 CD101Q93033 1021 aa17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 TMEM176AQ96HP8 235 aa17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 HINFPQ9BQA5 517 aa17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 TLR8Q9NR97 1041 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 EP300Q09472 2414 aaPredicted RBP17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 GVINP1Q7Z2Y8 2422 aa17.7■□□□□ 0.42
CACNA1A-259ENST00000638114 HHLA1C9JL84 531 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 TLR5O60602 858 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 LILRB5O75023 590 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 DRD1P21728 446 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 FMO5P49326 533 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 RAD23BP54727 409 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 STX17P56962 302 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 PAK1Q13153 545 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 CUL2Q13617 745 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 CAMK4Q16566 473 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 KIAA1958Q8N8K9 716 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 SLC4A11Q8NBS3 891 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 DUSP16Q9BY84 665 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 FAM124BQ9H5Z6 455 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 PNPLA8Q9NP80 782 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 C2orf42Q9NWW7 574 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 SCML2Q9UQR0 700 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 SH3BP1Q9Y3L3 701 aa17.69■□□□□ 0.42
CACNA1A-259ENST00000638114 ATG2BQ96BY7 2078 aa17.68■□□□□ 0.42
CACNA1A-259ENST00000638114 CYP26A1O43174 497 aa17.68■□□□□ 0.42
CACNA1A-259ENST00000638114 RNF40O75150 1001 aa17.68■□□□□ 0.42
CACNA1A-259ENST00000638114 PAPSS2O95340 614 aaPredicted RBP17.68■□□□□ 0.42
CACNA1A-259ENST00000638114 CYP17A1P05093 508 aa17.68■□□□□ 0.42
CACNA1A-259ENST00000638114 ANP32AP39687 249 aaKnown RBP17.68■□□□□ 0.42
CACNA1A-259ENST00000638114 PGFP49763 221 aa17.68■□□□□ 0.42
CACNA1A-259ENST00000638114 YWHAEP62258 255 aaKnown RBP17.68■□□□□ 0.42
CACNA1A-259ENST00000638114 HEATR6Q6AI08 1181 aaKnown RBP17.68■□□□□ 0.42
CACNA1A-259ENST00000638114 PKN3Q6P5Z2 889 aa17.68■□□□□ 0.42
CACNA1A-259ENST00000638114 FOXR2Q6PJQ5 311 aa17.68■□□□□ 0.42
CACNA1A-259ENST00000638114 SUMF1Q8NBK3 374 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms