RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 TKTL1P51854 596 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 MEA1Q16626 185 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 FIGNQ5HY92 759 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 TXNDC8Q6A555 127 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 VSTM4Q8IW00 320 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 DDX1Q92499 740 aaKnown RBP18.12■□□□□ 0.49
CLN6-218ENST00000637223 MRPS31Q92665 395 aaKnown RBP18.12■□□□□ 0.49
CLN6-218ENST00000637223 EDEM3Q9BZQ6 932 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 LRRC4Q9HBW1 653 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 TRPC7Q9HCX4 862 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 EPS15L1Q9UBC2 864 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 CHORDC1Q9UHD1 332 aaPredicted RBP18.12■□□□□ 0.49
CLN6-218ENST00000637223 CYTH4Q9UIA0 394 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 NOCTQ9UK39 431 aaKnown RBP18.12■□□□□ 0.49
CLN6-218ENST00000637223 MYO6Q9UM54 1294 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 ITIH6Q6UXX5 1313 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 FAM170AA1A519 330 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 FAM92AA1XBS5 289 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 GOLGA6L3A6NEY3 463 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 MMEP08473 750 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 USP17L7P0C7H9 530 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 LCP1P13796 627 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 FERP16591 822 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 PGFP49763 221 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 PTPN5P54829 565 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 ADIGQ0VDE8 80 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 ASIC2Q16515 512 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 RAB41Q5JT25 222 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 SPECC1LQ69YQ0 1117 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 MAB21L3Q8N8X9 362 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 C1orf131Q8NDD1 294 aaKnown RBP18.11■□□□□ 0.49
CLN6-218ENST00000637223 KCTD13Q8WZ19 329 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 ULBP1Q9BZM6 244 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 TASP1Q9H6P5 420 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 ST7Q9NRC1 585 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 GDE1Q9NZC3 331 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 LIMD1Q9UGP4 676 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 SCML2Q9UQR0 700 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 USP3Q9Y6I4 520 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 ZFP37Q9Y6Q3 630 aaPredicted RBP18.11■□□□□ 0.49
CLN6-218ENST00000637223 DENND4AQ7Z401 1863 aa18.11■□□□□ 0.49
CLN6-218ENST00000637223 A0A1W2PQJ5 194 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 C2orf78A6NCI8 922 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 ZNF840PA6NDX5 716 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 GABBR2O75899 941 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 GYPCP04921 128 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 SFMBT2Q5VUG0 894 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 E4F1Q66K89 784 aaPredicted RBP18.1■□□□□ 0.49
CLN6-218ENST00000637223 RNF135Q8IUD6 432 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 ZDHHC14Q8IZN3 488 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 SIX6OS1Q8N1H7 587 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 PLCD3Q8N3E9 789 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 WDTC1Q8N5D0 677 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 PDZD8Q8NEN9 1154 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 ZSCAN18Q8TBC5 510 aaPredicted RBP18.1■□□□□ 0.49
CLN6-218ENST00000637223 NDRG1Q92597 394 aaKnown RBP18.1■□□□□ 0.49
CLN6-218ENST00000637223 HSFY1Q96LI6 401 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 SLC46A2Q9BY10 475 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 LHX5Q9H2C1 402 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 CEP83Q9Y592 693 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.1■□□□□ 0.492e-8■■■□□ 18
CLN6-218ENST00000637223 NOTCH4Q99466 2003 aa18.1■□□□□ 0.49
CLN6-218ENST00000637223 A0A1W2PQH9 124 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 CHRNB2P17787 502 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 DDX6P26196 483 aaKnown RBP eCLIP18.09■□□□□ 0.49
CLN6-218ENST00000637223 CASP14P31944 242 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 PPP3CCP48454 512 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 ZNF75DP51815 510 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 FMO1Q01740 532 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 CDR2Q01850 454 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 PDCLQ13371 301 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 FAM78AQ5JUQ0 283 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 CCDC186Q7Z3E2 898 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 IRF2BP2Q7Z5L9 587 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 MON1AQ86VX9 555 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 ZNF677Q86XU0 584 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 OVCA2Q8WZ82 227 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 EDAQ92838 391 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 PBXIP1Q96AQ6 731 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 IQCDQ96DY2 449 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 MIS12Q9H081 205 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 SMG9Q9H0W8 520 aaKnown RBP18.09■□□□□ 0.49
CLN6-218ENST00000637223 NMUR1Q9HB89 426 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 CAPN11Q9UMQ6 739 aa18.09■□□□□ 0.49
CLN6-218ENST00000637223 TECTAO75443 2155 aa18.08■□□□□ 0.49
CLN6-218ENST00000637223 NCANO14594 1321 aa18.08■□□□□ 0.49
CLN6-218ENST00000637223 ZBED1O96006 694 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 ASGR2P07307 311 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 ZDHHC11BP0C7U3 371 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 CCDC172P0C7W6 258 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 ZBED6P86452 979 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 PARM1Q6UWI2 310 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 TMC6Q7Z403 805 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 SCD5Q86SK9 330 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 FMNL3Q8IVF7 1028 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 TMEM35BQ8NCS4 154 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 ZNF397Q8NF99 534 aaPredicted RBP18.08■□□□□ 0.48
CLN6-218ENST00000637223 CLEC4CQ8WTT0 213 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 STK32AQ8WU08 396 aa18.08■□□□□ 0.48
CLN6-218ENST00000637223 RSAD2Q8WXG1 361 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms