RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 COX16Q9P0S2 106 aa14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.64□□□□□ -0.07
CACNA1A-228ENST00000636610 NFKBIEO00221 500 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 MAGEB2O15479 319 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 ENO1P06733 434 aaKnown RBP14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 CALB2P22676 271 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 RCN1Q15293 331 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 EFCAB12Q6NXP0 572 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 TRMT10BQ6PF06 316 aaKnown RBP14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 TDRPQ86YL5 185 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 SLC25A41Q8N5S1 370 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 SLC4A11Q8NBS3 891 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 STK32AQ8WU08 396 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 WDR60Q8WVS4 1066 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 SEPT1Q8WYJ6 367 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 CYTH2Q99418 400 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 RPF1Q9H9Y2 349 aaKnown RBP14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 PDGFCQ9NRA1 345 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 HOXC10Q9NYD6 342 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 WDR81Q562E7 1941 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 ZWINTO95229 277 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 LSM8O95777 96 aaKnown RBP14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 VTNP04004 478 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 PTPN11Q06124 597 aaPredicted RBP14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 MUM1Q2TAK8 710 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 LRRC38Q5VT99 294 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 DRICH1Q6PGQ1 229 aaPredicted RBP14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 ARID3BQ8IVW6 561 aaPredicted RBP14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 C7orf31Q8N865 590 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 OSBPL1AQ9BXW6 950 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 PPP1R12CQ9BZL4 782 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 NMUR2Q9GZQ4 415 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 PCMTD2Q9NV79 361 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 MAFO75444 373 aaPredicted RBP14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 TMPRSS15P98073 1019 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 TMEM62Q0P6H9 643 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 CRYMQ14894 314 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 CASC4Q6P4E1 433 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 ZNF276Q8N554 614 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 SPATA33Q96N06 139 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 SRPK1Q96SB4 655 aaKnown RBP14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 MMP19Q99542 508 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 FOXP3Q9BZS1 431 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 SENP1Q9P0U3 644 aa14.63□□□□□ -0.07
CACNA1A-228ENST00000636610 COL11A1P12107 1806 aaPredicted RBP14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 H3BRJ5 948 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 COPEO14579 308 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 ATG7O95352 703 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 TRUB2O95900 331 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 PIGRP01833 764 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 ESRRAP11474 423 aaPredicted RBP14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 TUBP50607 506 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 MCCD1P59942 119 aaPredicted RBP14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 TARBP2Q15633 366 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 KLHL38Q2WGJ6 581 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 MPP5Q8N3R9 675 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 SHKBP1Q8TBC3 707 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 CDT1Q9H211 546 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 PPARGC1AQ9UBK2 798 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 ZC3H7BQ9UGR2 993 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 PRPSAP2O60256 369 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 PTPN4P29074 926 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 DALRD3Q5D0E6 543 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 FAM160B1Q5W0V3 765 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 C16orf46Q6P387 395 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 CEP128Q6ZU80 1094 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 MOB2Q70IA6 237 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 MZB1Q8WU39 189 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 NIFKQ9BYG3 293 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 RNPEPQ9H4A4 650 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 STRIP2Q9ULQ0 834 aa14.62□□□□□ -0.07
CACNA1A-228ENST00000636610 APOC4-APOC2K7ER74 178 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 C2CD2LO14523 706 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 APOC2P02655 101 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 SERPINB4P48594 390 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 NDST1P52848 882 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 ALDH18A1P54886 795 aaKnown RBP14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 CCDC15Q0P6D6 951 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 CTC1Q2NKJ3 1217 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 NAIF1Q69YI7 327 aaPredicted RBP14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 CAPRIN2Q6IMN6 1127 aaKnown RBP14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 MPZL3Q6UWV2 235 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 ZPBP2Q6X784 338 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 FAM183BPQ6ZVS7 135 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 TMEM134Q9H6X4 195 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 ACSS2Q9NR19 701 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 SMYD2Q9NRG4 433 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 MFHAS1Q9Y4C4 1052 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 A0A087WZ62 844 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 STAG3L1P0CL83 205 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 CCNHP51946 323 aaPredicted RBP14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 SLC45A4Q5BKX6 768 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 GLRA4Q5JXX5 417 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 CES4AQ5XG92 561 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 PCGF5Q86SE9 256 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 UCMAQ8WVF2 138 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 ATXN7L3BQ96GX2 97 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 RILPQ96NA2 401 aa14.61□□□□□ -0.07
CACNA1A-228ENST00000636610 FDXACB1Q9BRP7 624 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms