RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 TRAF3Q13114 568 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 CBLBQ13191 982 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 MYBPC3Q14896 1274 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 MINDY2Q8NBR6 621 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 C19orf44Q9H6X5 657 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 L1RE1Q9UN81 338 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 CABIN1Q9Y6J0 2220 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 C2orf71A6NGG8 1288 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 MCIDASD6RGH6 385 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 APRTP07741 180 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 H2AFXP16104 143 aaPredicted RBP6.2□□□□□ -1.42
SCN1A-212ENST00000636194 NPR2P20594 1047 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 UGT1A5P35504 534 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 RAD23AP54725 363 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 EEF1A2Q05639 463 aaKnown RBP6.2□□□□□ -1.42
SCN1A-212ENST00000636194 UBE3CQ15386 1083 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 GLB1LQ6UWU2 654 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 BNIPLQ7Z465 357 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 RHOT1Q8IXI2 618 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 P2RX5Q93086 422 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 RHOBTB2Q9BYZ6 727 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 CHMP1AQ9HD42 196 aaPredicted RBP6.2□□□□□ -1.42
SCN1A-212ENST00000636194 DAGLAQ9Y4D2 1042 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 NCAPD2Q15021 1401 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 UNC13CQ8NB66 2214 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 NDUFS2O75306 463 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 TNFRSF8P28908 595 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 MAD2L1Q13257 205 aaPredicted RBP6.2□□□□□ -1.42
SCN1A-212ENST00000636194 SQLEQ14534 574 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 MAPK11Q15759 364 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 GATAD2AQ86YP4 633 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 ANKFN1Q8N957 763 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 KLHL32Q96NJ5 620 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 SLC35C2Q9NQQ7 365 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 ABCA5Q8WWZ7 1642 aa6.2□□□□□ -1.42
SCN1A-212ENST00000636194 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF432O94892 652 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 PLCG1P19174 1290 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SPRP35270 261 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 EIF4A3P38919 411 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SLC11A2P49281 568 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SLC7A2P52569 658 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 EFNA5P52803 228 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 PDK1Q15118 436 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SGO1Q5FBB7 561 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF658Q5TYW1 1059 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 LRRC69Q6ZNQ3 347 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 MCEMP1Q8IX19 187 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SPICE1Q8N0Z3 855 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 DPF1Q92782 380 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CCT8L2Q96SF2 557 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 C12orf4Q9NQ89 552 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 PNMA8BQ9ULN7 279 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 PCDHA13Q9Y5I0 950 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SNX14Q9Y5W7 946 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 XPO1O14980 1071 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 KCNN4O15554 427 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 HOXA2O43364 376 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 VAMP4O75379 141 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CYP7B1O75881 506 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 HOXB7P09629 217 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 COX7A2P14406 83 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TLX1P31314 330 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CDH6P55285 790 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 S100A12P80511 92 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TDRD10Q5VZ19 366 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SMIM5Q71RC9 77 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SFR1Q86XK3 245 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 LRRC8AQ8IWT6 810 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 PABPC5Q96DU9 382 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SPACA7Q96KW9 195 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 RPRD1AQ96P16 312 aaPredicted RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 DESI2Q9BSY9 194 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 INTS10Q9NVR2 710 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 RNF112Q9ULX5 631 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TNRQ92752 1358 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF407Q9C0G0 2248 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 A0A0J9YVX5 310 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 E7ENQ6 273 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 KIAA0391O15091 583 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 NUAK1O60285 661 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 PRLRP16471 622 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF3P17036 446 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CCNA2P20248 432 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SCP2P22307 547 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 DSG3P32926 999 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 EIF3EP60228 445 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 STXBP1P61764 594 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 PAPD7Q5XG87 772 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ITIH5Q86UX2 942 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 HERC6Q8IVU3 1022 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SPATA33Q96N06 139 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 CST11Q9H112 138 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 THAP9Q9H5L6 903 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 NDUFA13Q9P0J0 144 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 FBXO10Q9UK96 956 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TDRKHQ9Y2W6 561 aaKnown RBP6.19□□□□□ -1.42
SCN1A-212ENST00000636194 TRIM64CA6NLI5 447 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 SERPINA1P01009 418 aa6.19□□□□□ -1.42
SCN1A-212ENST00000636194 ENO3P13929 434 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms