RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 MARK2Q7KZI7 788 aaKnown RBP12.06□□□□□ -0.48
COL11A1-211ENST00000635193 SLC47A2Q86VL8 602 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 CAPSLQ8WWF8 208 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 DUSP9Q99956 384 aaKnown RBP12.06□□□□□ -0.48
COL11A1-211ENST00000635193 STK39Q9UEW8 545 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 A0A087X0B3 334 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 E9PBE3 544 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 KLHL41O60662 606 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 FCGR1AP12314 374 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 TNFRSF8P28908 595 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 PTDSS1P48651 473 aaKnown RBP12.06□□□□□ -0.48
COL11A1-211ENST00000635193 XRCC4Q13426 336 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 PTK6Q13882 451 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 ATF7IP2Q5U623 682 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 KCNV1Q6PIU1 500 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 SH3TC2Q8TF17 1288 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 MMP19Q99542 508 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 TARS2Q9BW92 718 aaKnown RBP12.06□□□□□ -0.48
COL11A1-211ENST00000635193 ATXN10Q9UBB4 475 aa12.06□□□□□ -0.48
COL11A1-211ENST00000635193 CAMTA2O94983 1202 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 NFIXQ14938 502 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 RGS21Q2M5E4 152 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 DCAF4L1Q3SXM0 396 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 DCAF6Q58WW2 860 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 MSL3Q8N5Y2 521 aaKnown RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 PABPC5Q96DU9 382 aaKnown RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 FAR2Q96K12 515 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 CBWD1Q9BRT8 395 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 DCLK3Q9C098 648 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 TJP2Q9UDY2 1190 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 A0A0U1RQJ8 604 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 SDR42E2A6NKP2 422 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 CNTFP26441 200 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 GTF2H3Q13889 308 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 NEDD8Q15843 81 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 DENND1BQ6P3S1 775 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 MOXD1Q6UVY6 613 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 CD302Q8IX05 232 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 SIX5Q8N196 739 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 SLC7A14Q8TBB6 771 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 RSPH1Q8WYR4 309 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 OXNAD1Q96HP4 312 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 TMEM165Q9HC07 324 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 HMG20AQ9NP66 347 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 SALL1Q9NSC2 1324 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 LIN7AO14910 233 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 ZC3H11AO75152 810 aaKnown RBP eCLIP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 MED26O95402 600 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 IMPDH2P12268 514 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 GNL1P36915 607 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 CHN2P52757 468 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 ITGADQ13349 1161 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 MTMR2Q13614 643 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 NT5DC3Q86UY8 548 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 LENG1Q96BZ8 264 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 PLEKHA8Q96JA3 519 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 C17orf75Q9HAS0 396 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 TRPC7Q9HCX4 862 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 NINJ2Q9NZG7 142 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 ABCA9Q8IUA7 1624 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 A0A087WXM4 84 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 PDE2AO00408 941 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 CLASP2O75122 1294 aaKnown RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 ATP6V1C1P21283 382 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 AVPR1AP37288 418 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 TRAF2Q12933 501 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 MMRN1Q13201 1228 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 ITGB3BPQ13352 177 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 COG2Q14746 738 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 EARS2Q5JPH6 523 aaKnown RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 TCHHL1Q5QJ38 904 aaPredicted RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 TTC23LQ6PF05 361 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 EIF1ADQ8N9N8 165 aaKnown RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 KYQ8NBH2 561 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 TCP10LQ8TDR4 215 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 DEPDC7Q96QD5 511 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 GINS4Q9BRT9 223 aa12.05□□□□□ -0.48
COL11A1-211ENST00000635193 REXO4Q9GZR2 422 aaKnown RBP12.05□□□□□ -0.48
COL11A1-211ENST00000635193 SMIM31A0A1B0GVY4 71 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 C5orf58C9J3I9 102 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 CYTH3O43739 400 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 NTSR2O95665 410 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 HIST1H2AGP0C0S8 130 aaPredicted RBP12.04□□□□□ -0.48
COL11A1-211ENST00000635193 HIST1H2ADP20671 130 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 RPL10AP62906 217 aaKnown RBP12.04□□□□□ -0.48
COL11A1-211ENST00000635193 TRIP4Q15650 581 aaPredicted RBP12.04□□□□□ -0.48
COL11A1-211ENST00000635193 FUT11Q495W5 492 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 ZNF618Q5T7W0 954 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 LINC00523Q86TU6 105 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 ASZ1Q8WWH4 475 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 SEPT1Q8WYJ6 367 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 LPAR1Q92633 364 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 SLC5A5Q92911 643 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 CENPTQ96BT3 561 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 HIST1H2AHQ96KK5 128 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 HIST1H2AJQ99878 128 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 H2AFJQ9BTM1 129 aa12.04□□□□□ -0.48
COL11A1-211ENST00000635193 IPPQ9Y573 584 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms