RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 ANKRD52Q8NB46 1076 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 OSCP1Q8WVF1 389 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 RNF38Q9H0F5 515 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 INTS2Q9H0H0 1204 aaKnown RBP16.57■□□□□ 0.24
LINC00339-207ENST00000634712 SMPD4Q9NXE4 827 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 CPQQ9Y646 472 aa16.57■□□□□ 0.24
LINC00339-207ENST00000634712 FAM92AA1XBS5 289 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 LEFTY2O00292 366 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 MBD3O95983 291 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 OAS1P00973 400 aaKnown RBP16.56■□□□□ 0.24
LINC00339-207ENST00000634712 TCF3P15923 654 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 USP4Q13107 963 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 NR1H3Q13133 447 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 ANGPT1Q15389 498 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 SNX30Q5VWJ9 437 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 SASS6Q6UVJ0 657 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 DDX42Q86XP3 938 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC00339-207ENST00000634712 CPA6Q8N4T0 437 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 LMO3Q8TAP4 145 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 EXOC4Q96A65 974 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 MED15Q96RN5 788 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 UBXN6Q9BZV1 441 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 LMAN1LQ9HAT1 526 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 SPATA6Q9NWH7 488 aaPredicted RBP16.56■□□□□ 0.24
LINC00339-207ENST00000634712 DLGAP2Q9P1A6 1054 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 SCML2Q9UQR0 700 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 F5P12259 2224 aa16.56■□□□□ 0.24
LINC00339-207ENST00000634712 HHLA1C9JL84 531 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 PAEPP09466 180 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 ARSAP15289 507 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 CTHP32929 405 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 TUBP50607 506 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 GCNT1Q02742 428 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 GOLGA7BQ2TAP0 167 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 MIA3Q5JRA6 1907 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 GBP6Q6ZN66 633 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 GPRIN1Q7Z2K8 1008 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 C1orf210Q8IVY1 113 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 ATP2A3Q93084 1043 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 CLDN23Q96B33 292 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 FAM81BQ96LP2 452 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 CRACR2AQ9BSW2 395 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 CCSER2Q9H7U1 834 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 UBE2TQ9NPD8 197 aaPredicted RBP16.55■□□□□ 0.24
LINC00339-207ENST00000634712 TSPAN16Q9UKR8 245 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 WNT6Q9Y6F9 365 aa16.55■□□□□ 0.24
LINC00339-207ENST00000634712 SLC9A3R1O14745 358 aaPredicted RBP16.54■□□□□ 0.24
LINC00339-207ENST00000634712 COCHO43405 550 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 LAMTOR5O43504 91 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 TLR5O60602 858 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 OLFM2O95897 454 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 ZDHHC11BP0C7U3 371 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 KRT5P13647 590 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 PRKCSHP14314 528 aaPredicted RBP16.54■□□□□ 0.24
LINC00339-207ENST00000634712 RPS9P46781 194 aaKnown RBP16.54■□□□□ 0.24
LINC00339-207ENST00000634712 KIF11P52732 1056 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 BCAT1P54687 386 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 LRRC32Q14392 662 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 PON2Q15165 354 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 TADA2BQ86TJ2 420 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 IRF2BP1Q8IU81 584 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 ARHGEF19Q8IW93 802 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 UBR7Q8N806 425 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 RIN3Q8TB24 985 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 KAT5Q92993 513 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 HPS4Q9NQG7 708 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 CFAP97Q9P2B7 532 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 SH3BP1Q9Y3L3 701 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 COL4A3Q01955 1670 aa16.54■□□□□ 0.24
LINC00339-207ENST00000634712 SHISA7A6NL88 538 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 PES1O00541 588 aaKnown RBP16.53■□□□□ 0.24
LINC00339-207ENST00000634712 CYP26A1O43174 497 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 NFATC1O95644 943 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 RALAP11233 206 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 ATP5C1P36542 298 aaKnown RBP16.53■□□□□ 0.24
LINC00339-207ENST00000634712 PSEN1P49768 467 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 MFAP3P55082 362 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 BST2Q10589 180 aaKnown RBP16.53■□□□□ 0.24
LINC00339-207ENST00000634712 STILQ15468 1287 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 MAN2A1Q16706 1144 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 EXOC3L4Q17RC7 722 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 HSP90AA4PQ58FG1 418 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 ENOSF1Q7L5Y1 443 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 PIGZQ86VD9 579 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 KIAA1958Q8N8K9 716 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 RBBP8NLQ8NC74 664 aaPredicted RBP16.53■□□□□ 0.24
LINC00339-207ENST00000634712 UBA3Q8TBC4 463 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 LINC00597Q9H2U6 94 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 ECT2Q9H8V3 914 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 LRRC4Q9HBW1 653 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 FAM86C1Q9NVL1 165 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 NAGPAQ9UK23 515 aa16.53■□□□□ 0.24
LINC00339-207ENST00000634712 A0A1W2PQH9 124 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 XPO1O14980 1071 aaKnown RBP16.52■□□□□ 0.24
LINC00339-207ENST00000634712 RARGP13631 454 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 ZXDBP98169 803 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 PDE4CQ08493 712 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 GOLGA8FQ08AF8 430 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 GOLGA8DPQ0D2H9 430 aa16.52■□□□□ 0.24
LINC00339-207ENST00000634712 GRSF1Q12849 480 aaKnown RBP eCLIP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms