RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 PTPN20Q4JDL3 420 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 PMF1Q6P1K2 205 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 SYCE2Q6PIF2 218 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 DENND5BQ6ZUT9 1274 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 GPRIN1Q7Z2K8 1008 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 CCDC186Q7Z3E2 898 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 TMEM110Q86TL2 294 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 ITIH5Q86UX2 942 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 VPS36Q86VN1 386 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 PHF13Q86YI8 300 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 TMC8Q8IU68 726 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 PASD1Q8IV76 773 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 NUP93Q8N1F7 819 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 MSLNLQ96KJ4 702 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 NOX5Q96PH1 765 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 PPP1R9BQ96SB3 815 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 CHP1Q99653 195 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 LRRC3Q9BY71 257 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 PRKD2Q9BZL6 878 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 IGFLR1Q9H665 355 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 NHEJ1Q9H9Q4 299 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 AVENQ9NQS1 362 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 EHD2Q9NZN4 543 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 USP3Q9Y6I4 520 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 GREB1Q4ZG55 1949 aa10.38□□□□□ -0.75
SOX2-OT-249ENST00000628810 A0A087X0T9 212 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 SLC38A8A6NNN8 435 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 XYLBO75191 536 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 LCA5LO95447 670 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 FAM228BP0C875 321 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 TNFAIP3P21580 790 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 MMP8P22894 467 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 EIF4A3P38919 411 aaKnown RBP10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 ACADSBP45954 432 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 CCDC173Q0VFZ6 552 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 PTP4A2Q12974 167 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 SDHAF4Q5VUM1 108 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 NAA35Q5VZE5 725 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 PM20D1Q6GTS8 502 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 MON1BQ7L1V2 547 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 BHLHA9Q7RTU4 235 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 DENND4AQ7Z401 1863 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 DNAJB7Q7Z6W7 309 aaPredicted RBP10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 TMTC1Q8IUR5 882 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 CCDC170Q8IYT3 715 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 ELMOD1Q8N336 334 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 LEMD2Q8NC56 503 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 MSANTD4Q8NCY6 345 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 CCDC112Q8NEF3 446 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 OVCA2Q8WZ82 227 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 PPP1R13BQ96KQ4 1090 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 CPXM1Q96SM3 734 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 BAG1Q99933 345 aaPredicted RBP10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 ISCUQ9H1K1 167 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 S1PR5Q9H228 398 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 PDCL3Q9H2J4 239 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 FBXO44Q9H4M3 255 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 ADAMTS1Q9UHI8 967 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 NAGPAQ9UK23 515 aa10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 PRRC2BQ5JSZ5 2229 aaKnown RBP10.37□□□□□ -0.75
SOX2-OT-249ENST00000628810 CCDC195A0A1B0GUA6 201 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 E5RJQ4 531 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 CCL16O15467 120 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 TADA3O75528 432 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 FBXO21O94952 628 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 FGF19O95750 216 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 ERBB2P04626 1255 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 SCNN1AP37088 669 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 NSFP46459 744 aaKnown RBP10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 TKTL1P51854 596 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 SNX16P57768 344 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 USP46P62068 366 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 ITIH3Q06033 890 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 DLX2Q07687 328 aaPredicted RBP10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 ADIGQ0VDE8 80 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 MTMR3Q13615 1198 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 SNX30Q5VWJ9 437 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 ACAD10Q6JQN1 1059 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 GPR149Q86SP6 731 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 ZDHHC17Q8IUH5 632 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 LRRC8AQ8IWT6 810 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 MICALL1Q8N3F8 863 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 SMRP1Q8NCR6 262 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 STKLD1Q8NE28 680 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 SCAMP5Q8TAC9 235 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 GPR152Q8TDT2 470 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 IPO4Q8TEX9 1081 aaKnown RBP10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 GIPC2Q8TF65 315 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 IRGQQ8WZA9 623 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 VCPIP1Q96JH7 1222 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 CCDC42Q96M95 316 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 MIS12Q9H081 205 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 ADAM7Q9H2U9 754 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 IL21Q9HBE4 155 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 LRRC4Q9HBW1 653 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 ZNF334Q9HCZ1 680 aaPredicted RBP10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 CNGB3Q9NQW8 809 aa10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 SEPT11Q9NVA2 429 aaKnown RBP10.36□□□□□ -0.75
SOX2-OT-249ENST00000628810 CLDND1Q9NY35 253 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms