RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 FAM83CQ9BQN1 747 aa17.67■□□□□ 0.42
UBE3D-208ENST00000626828 CNTN6Q9UQ52 1028 aa17.67■□□□□ 0.42
UBE3D-208ENST00000626828 MUC6Q6W4X9 2439 aa17.67■□□□□ 0.42
UBE3D-208ENST00000626828 CACNA1HO95180 2353 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 OLFM2O95897 454 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 PON1P27169 355 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 TUBP50607 506 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 KPNA1P52294 538 aaPredicted RBP17.66■□□□□ 0.42
UBE3D-208ENST00000626828 PDGFRLQ15198 375 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 ITPRIPL2Q3MIP1 535 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 HSP90AA4PQ58FG1 418 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 TCP11X2Q5H9J9 407 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 LCLAT1Q6UWP7 414 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 SH3RF2Q8TEC5 729 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 MSANTD3Q96H12 275 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 KREMEN1Q96MU8 473 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 GMIPQ9P107 970 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 TMEM63CQ9P1W3 806 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 RAPGEFL1Q9UHV5 662 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 TSPAN16Q9UKR8 245 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 USP3Q9Y6I4 520 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 PIAS3Q9Y6X2 628 aa17.66■□□□□ 0.42
UBE3D-208ENST00000626828 O00370 1275 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 MBL2P11226 248 aaPredicted RBP17.65■□□□□ 0.42
UBE3D-208ENST00000626828 PTMSP20962 102 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 CD72P21854 359 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 PSEN1P49768 467 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 BCAT1P54687 386 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 BST2Q10589 180 aaKnown RBP17.65■□□□□ 0.42
UBE3D-208ENST00000626828 RUNX3Q13761 415 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 MTF1Q14872 753 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 UBXN2BQ14CS0 331 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 ZNF77Q15935 545 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 GOLGA7BQ2TAP0 167 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 GPRIN1Q7Z2K8 1008 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 PIGZQ86VD9 579 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 TTC30AQ86WT1 665 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 RALGPS2Q86X27 583 aaPredicted RBP17.65■□□□□ 0.42
UBE3D-208ENST00000626828 DDX42Q86XP3 938 aaKnown RBP eCLIP17.65■□□□□ 0.42
UBE3D-208ENST00000626828 RBBP8NLQ8NC74 664 aaPredicted RBP17.65■□□□□ 0.42
UBE3D-208ENST00000626828 PJA1Q8NG27 643 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 FAM3CQ92520 227 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 FOXQ1Q9C009 403 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 LTB4R2Q9NPC1 389 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 GTSE1Q9NYZ3 720 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 APEX2Q9UBZ4 518 aa17.65■□□□□ 0.42
UBE3D-208ENST00000626828 CACNA1IQ9P0X4 2223 aa17.64■□□□□ 0.42
UBE3D-208ENST00000626828 LEFTY2O00292 366 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 PES1O00541 588 aaKnown RBP17.64■□□□□ 0.41
UBE3D-208ENST00000626828 XPO1O14980 1071 aaKnown RBP17.64■□□□□ 0.41
UBE3D-208ENST00000626828 COCHO43405 550 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 GALR2O43603 387 aaPredicted RBP17.64■□□□□ 0.41
UBE3D-208ENST00000626828 LETM1O95202 739 aaPredicted RBP17.64■□□□□ 0.41
UBE3D-208ENST00000626828 AMPD2Q01433 879 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 PDE4CQ08493 712 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 RAB41Q5JT25 222 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 MIIPQ5JXC2 388 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 CCDC186Q7Z3E2 898 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 ZNF276Q8N554 614 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 TTC16Q8NEE8 873 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 UBA3Q8TBC4 463 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 OSCP1Q8WVF1 389 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 TFAP2BQ92481 460 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 NAT10Q9H0A0 1025 aaKnown RBP17.64■□□□□ 0.41
UBE3D-208ENST00000626828 IRF2BPLQ9H1B7 796 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 FANCLQ9NW38 375 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 DUS2Q9NX74 493 aaKnown RBP17.64■□□□□ 0.41
UBE3D-208ENST00000626828 CPQQ9Y646 472 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 TICRRQ7Z2Z1 1910 aa17.64■□□□□ 0.41
UBE3D-208ENST00000626828 SHISA7A6NL88 538 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 SLC9A3R1O14745 358 aaPredicted RBP17.63■□□□□ 0.41
UBE3D-208ENST00000626828 DCNP07585 359 aaKnown RBP17.63■□□□□ 0.41
UBE3D-208ENST00000626828 TPM2P07951 284 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 SETSIPP0DME0 302 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 KRT5P13647 590 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 ATP5C1P36542 298 aaKnown RBP17.63■□□□□ 0.41
UBE3D-208ENST00000626828 MAGEA9P43362 315 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 IFNAR2P48551 515 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 ZNF132P52740 706 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 ZXDBP98169 803 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 TYRO3Q06418 890 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 TNK2Q07912 1038 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 USP4Q13107 963 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 NR1H3Q13133 447 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 PKDCCQ504Y2 493 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 CDKAL1Q5VV42 579 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 CAVIN1Q6NZI2 390 aaKnown RBP17.63■□□□□ 0.41
UBE3D-208ENST00000626828 C11orf57Q6ZUT1 292 aaPredicted RBP17.63■□□□□ 0.41
UBE3D-208ENST00000626828 ARHGAP18Q8N392 663 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 DTWD2Q8NBA8 298 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 TTC8Q8TAM2 541 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 KCTD13Q8WZ19 329 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 NACA2Q9H009 215 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 EBF3Q9H4W6 596 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 CCSER2Q9H7U1 834 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 LRRC4Q9HBW1 653 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 CYLDQ9NQC7 956 aa17.63■□□□□ 0.41
UBE3D-208ENST00000626828 MTF2Q9Y483 593 aaPredicted RBP17.63■□□□□ 0.41
UBE3D-208ENST00000626828 SPECC1L-ADORA2AF8WAN1 911 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 TLR5O60602 858 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms