RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 NMD3Q96D46 503 aaKnown RBP4.06□□□□□ -1.76
VBP1-204ENST00000625964 SNX14Q9Y5W7 946 aa4.06□□□□□ -1.76
VBP1-204ENST00000625964 CCDC187A0A096LP49 1063 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 LOC102723971A0A1B0GUV8 181 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 H7C4K7 107 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 PPP6CO00743 305 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 RGS10O43665 173 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 SRGAP2O75044 1071 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 RASAL1O95294 804 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 TOP3BO95985 862 aaKnown RBP4.05□□□□□ -1.76
VBP1-204ENST00000625964 ENGP17813 658 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 CYP2C18P33260 490 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 MMP13P45452 471 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 ITGA8P53708 1063 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 TPTEP56180 551 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 INSCQ1MX18 579 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 PTCHD3Q3KNS1 767 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 ZNF260Q3ZCT1 412 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 ABRAQ8N0Z2 381 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 C8orf48Q96LL4 319 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 GBA2Q9HCG7 927 aaPredicted RBP4.05□□□□□ -1.76
VBP1-204ENST00000625964 TUBA8Q9NY65 449 aaPredicted RBP4.05□□□□□ -1.76
VBP1-204ENST00000625964 COL20A1Q9P218 1284 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 ITGB1BP2Q9UKP3 347 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 SH2B3Q9UQQ2 575 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 FAM50BQ9Y247 325 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 SNX13Q9Y5W8 968 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 CDY1Q9Y6F8 540 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 H0YIZ8 118 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 RAB27BO00194 218 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 PQBP1O60828 265 aaKnown RBP4.05□□□□□ -1.76
VBP1-204ENST00000625964 VNN1O95497 513 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 HNRNPCP07910 306 aaKnown RBP eCLIP4.05□□□□□ -1.76
VBP1-204ENST00000625964 FAM163BP0C2L3 166 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 PTDSS1P48651 473 aaKnown RBP4.05□□□□□ -1.76
VBP1-204ENST00000625964 EEFSECP57772 596 aaKnown RBP4.05□□□□□ -1.76
VBP1-204ENST00000625964 LY6KQ17RY6 165 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 CERCAMQ5T4B2 595 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 SLC18B1Q6NT16 456 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 ANKRD16Q6P6B7 361 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 SLC29A4Q7RTT9 530 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 KCTD20Q7Z5Y7 419 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 CCAR1Q8IX12 1150 aaKnown RBP4.05□□□□□ -1.76
VBP1-204ENST00000625964 IZUMO1Q8IYV9 350 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 DNAJB14Q8TBM8 379 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 CCDC136Q96JN2 1154 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 DPCDQ9BVM2 203 aaPredicted RBP4.05□□□□□ -1.76
VBP1-204ENST00000625964 BTBD1Q9H0C5 482 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 NUP62CLQ9H1M0 184 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 DLL3Q9NYJ7 618 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 CORO2BQ9UQ03 480 aa4.05□□□□□ -1.76
VBP1-204ENST00000625964 CACNA1IQ9P0X4 2223 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 CCP110O43303 1012 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 NPSP0C0P6 89 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 IL1R1P14778 569 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 ACVR2AP27037 513 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 PRKAR1BP31321 381 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 CARSP49589 748 aaKnown RBP4.04□□□□□ -1.76
VBP1-204ENST00000625964 CCNIQ14094 377 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 SLC29A2Q14542 456 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 AARS2Q5JTZ9 985 aaKnown RBP4.04□□□□□ -1.76
VBP1-204ENST00000625964 PCID2Q5JVF3 399 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 PXDC1Q5TGL8 231 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 KIAA1161Q6NSJ0 714 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 UNC13DQ70J99 1090 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 WDR53Q7Z5U6 358 aaPredicted RBP4.04□□□□□ -1.76
VBP1-204ENST00000625964 CAND1Q86VP6 1230 aaKnown RBP4.04□□□□□ -1.76
VBP1-204ENST00000625964 YAF2Q8IY57 180 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 FANCBQ8NB91 859 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 SOCS4Q8WXH5 440 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 C17orf80Q9BSJ5 609 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 XPNPEP3Q9NQH7 507 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 DDX21Q9NR30 783 aaKnown RBP eCLIP4.04□□□□□ -1.76
VBP1-204ENST00000625964 DUSP22Q9NRW4 184 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 MID2Q9UJV3 735 aa4.04□□□□□ -1.76
VBP1-204ENST00000625964 SERINC4A6NH21 518 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 RHPN2P1A8MT19 583 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 TARM1B6A8C7 271 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 ERVV-2B6SEH9 535 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 KIF3BO15066 747 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 RRP9O43818 475 aaKnown RBP4.03□□□□□ -1.76
VBP1-204ENST00000625964 PIAS2O75928 621 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 TUBB4AP04350 444 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 TXNP10599 105 aaKnown RBP4.03□□□□□ -1.76
VBP1-204ENST00000625964 KRT10P13645 584 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 RPL17P18621 184 aaKnown RBP4.03□□□□□ -1.76
VBP1-204ENST00000625964 MTHFSP49914 203 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 STK3Q13188 491 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 ARHGEF7Q14155 803 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 TMEM119Q4V9L6 283 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 COBLL1Q53SF7 1204 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 CEP85Q6P2H3 762 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 NAPRTQ6XQN6 538 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 DPY19L3Q6ZPD9 716 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 Q6ZWC4 215 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 PARS2Q7L3T8 475 aaKnown RBP4.03□□□□□ -1.76
VBP1-204ENST00000625964 ZNF804AQ7Z570 1209 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 KRT78Q8N1N4 520 aa4.03□□□□□ -1.76
VBP1-204ENST00000625964 RP9Q8TA86 221 aaKnown RBP4.03□□□□□ -1.76
VBP1-204ENST00000625964 SMCR8Q8TEV9 937 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms