RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 JAKMIP2Q96AA8 810 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 OTUB2Q96DC9 234 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 TMEM176AQ96HP8 235 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 SLC22A12Q96S37 553 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 CYP2S1Q96SQ9 504 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 DUSP16Q9BY84 665 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 SMG9Q9H0W8 520 aaKnown RBP13.16□□□□□ -0.3
LINC00963-217ENST00000624009 HPS4Q9NQG7 708 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 PRMT8Q9NR22 394 aaPredicted RBP13.16□□□□□ -0.3
LINC00963-217ENST00000624009 GKN1Q9NS71 199 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 FAM49BQ9NUQ9 324 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 GTSE1Q9NYZ3 720 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 CTNND2Q9UQB3 1225 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 SCML2Q9UQR0 700 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 SDK1Q7Z5N4 2213 aa13.16□□□□□ -0.3
LINC00963-217ENST00000624009 HHLA1C9JL84 531 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 TRDMT1O14717 391 aaKnown RBP13.15□□□□□ -0.3
LINC00963-217ENST00000624009 LRRN2O75325 713 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 PAPSS2O95340 614 aaPredicted RBP13.15□□□□□ -0.3
LINC00963-217ENST00000624009 CHRNB1P11230 501 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 CD58P19256 250 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 CD72P21854 359 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 RAD23BP54727 409 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 SLC8A3P57103 927 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 NR1H3Q13133 447 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 CCINQ13939 588 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 HECTD3Q5T447 861 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 UBR7Q8N806 425 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 SCAMP5Q8TAC9 235 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 LMO3Q8TAP4 145 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 SH3RF2Q8TEC5 729 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 NELL1Q92832 810 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 ELMO3Q96BJ8 720 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 ZFYVE19Q96K21 471 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 FAM81BQ96LP2 452 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 NT5C1BQ96P26 610 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 GBP4Q96PP9 640 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 CDK5RAP1Q96SZ6 601 aaKnown RBP13.15□□□□□ -0.3
LINC00963-217ENST00000624009 CYLDQ9NQC7 956 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 TLR8Q9NR97 1041 aaKnown RBP13.15□□□□□ -0.3
LINC00963-217ENST00000624009 DUS2Q9NX74 493 aaKnown RBP13.15□□□□□ -0.3
LINC00963-217ENST00000624009 TBC1D14Q9P2M4 693 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC00963-217ENST00000624009 USP3Q9Y6I4 520 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 KIAA1549LQ6ZVL6 1849 aa13.15□□□□□ -0.3
LINC00963-217ENST00000624009 E2F8A0AVK6 867 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 LAMTOR5O43504 91 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 BEST1O76090 585 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 NFATC1O95644 943 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 PAEPP09466 180 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 ERCC5P28715 1186 aaPredicted RBP13.14□□□□□ -0.31
LINC00963-217ENST00000624009 IFNAR2P48551 515 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 MRE11P49959 708 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 CCR3P51677 355 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 KIF11P52732 1056 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 MAP3K7CLP57077 242 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 TNK2Q07912 1038 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 KCNH2Q12809 1159 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 CAMK4Q16566 473 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 EML3Q32P44 896 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 PPP1R26Q5T8A7 1209 aaPredicted RBP13.14□□□□□ -0.31
LINC00963-217ENST00000624009 CCDC186Q7Z3E2 898 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 TADA2BQ86TJ2 420 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 SPEM1Q8N4L4 309 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 ANKRD52Q8NB46 1076 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 RIN3Q8TB24 985 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 TATDN2Q93075 761 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 HEXIM2Q96MH2 286 aaKnown RBP13.14□□□□□ -0.31
LINC00963-217ENST00000624009 ARID3AQ99856 593 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 SRRTQ9BXP5 876 aaKnown RBP13.14□□□□□ -0.31
LINC00963-217ENST00000624009 RNF38Q9H0F5 515 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 EBF3Q9H4W6 596 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 ECT2Q9H8V3 914 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 SPATA6Q9NWH7 488 aaPredicted RBP13.14□□□□□ -0.31
LINC00963-217ENST00000624009 DACH1Q9UI36 760 aa13.14□□□□□ -0.31
LINC00963-217ENST00000624009 GTPBP10A4D1E9 387 aaKnown RBP13.13□□□□□ -0.31
LINC00963-217ENST00000624009 LEFTY2O00292 366 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 AFPP02771 609 aaKnown RBP13.13□□□□□ -0.31
LINC00963-217ENST00000624009 SP9P0CG40 484 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 VDRP11473 427 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 DRD1P21728 446 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 ADORA2BP29275 332 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 HOXA6P31267 233 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 NRLP54845 237 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 ZXDBP98169 803 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 GRSF1Q12849 480 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC00963-217ENST00000624009 ORC1Q13415 861 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 STILQ15468 1287 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 MEA1Q16626 185 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 FBXO43Q4G163 708 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 SGO2Q562F6 1265 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 TMEM196Q5HYL7 178 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 RAB41Q5JT25 222 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 TXNDC11Q6PKC3 985 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 GPIHBP1Q8IV16 184 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 MAML2Q8IZL2 1156 aaPredicted RBP13.13□□□□□ -0.31
LINC00963-217ENST00000624009 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
LINC00963-217ENST00000624009 NUP62CLQ9H1M0 184 aa13.13□□□□□ -0.31
LINC00963-217ENST00000624009 LMAN1LQ9HAT1 526 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms