RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CALR3Q96L12 384 aaKnown RBP18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 PRO3102Q9H379 93 aa18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 ATG2AQ2TAZ0 1938 aa18.72■□□□□ 0.59
PTCHD3-202ENST00000622555 GRID2IPA4D2P6 1211 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 KIF2AO00139 706 aaPredicted RBP18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 PRRG1O14668 218 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 PALMO75781 387 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 TUBB4AP04350 444 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 USP17L7P0C7H9 530 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 RNASE9P60153 205 aaKnown RBP18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 RPL7AP62424 266 aaKnown RBP18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 MRPS5P82675 430 aaKnown RBP18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 SMAD3P84022 425 aaKnown RBP18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 IFRD2Q12894 506 aaPredicted RBP18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 SLC35F6Q8N357 371 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 STKLD1Q8NE28 680 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 TRIM58Q8NG06 486 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 SCAMP5Q8TAC9 235 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 GPR152Q8TDT2 470 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 NDRG1Q92597 394 aaKnown RBP18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 BTBD6Q96KE9 485 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 TRIM7Q9C029 511 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 CNGB3Q9NQW8 809 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 HSFX1Q9UBD0 423 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 TMEM191CA6NGB0 347 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 TMEM110-MUSTN1A8MSY1 372 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 DYNC1I1O14576 645 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 TNFRSF10BO14763 440 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 TGM5O43548 720 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 BUB1BO60566 1050 aaPredicted RBP18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 GRAP2O75791 330 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 ZBED1O96006 694 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 ETF1P62495 437 aaKnown RBP18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 PDE12Q6L8Q7 609 aaKnown RBP18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 DAAM2Q86T65 1068 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 NUP93Q8N1F7 819 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 JOSD2Q8TAC2 188 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 GDPD5Q8WTR4 605 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 SPATA17Q96L03 361 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 MAFFQ9ULX9 164 aa18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 MTCL1Q9Y4B5 1905 aaKnown RBP18.71■□□□□ 0.59
PTCHD3-202ENST00000622555 MYO1FO00160 1098 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 SPATA31D3P0C874 917 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 RFC1P35251 1148 aaPredicted RBP18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 SCNN1AP37088 669 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 DAOAP59103 153 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 MESDQ14696 234 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 TAF5Q15542 800 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 EFHC1Q5JVL4 640 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 SPATA31D4Q6ZUB0 917 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 SLC26A9Q7LBE3 791 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 TCEAL8Q8IYN2 117 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 EMC1Q8N766 993 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 FAM149B1Q96BN6 582 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 WDR24Q96S15 920 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 GOLPH3Q9H4A6 298 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 YIPF1Q9Y548 306 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 CHD9Q3L8U1 2897 aa18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 COL4A4P53420 1690 aaPredicted RBP18.7■□□□□ 0.58
PTCHD3-202ENST00000622555 SART1O43290 800 aaKnown RBP18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 GLUD1P00367 558 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 ATF6P18850 670 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 SYT10Q6XYQ8 523 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 DENND5BQ6ZUT9 1274 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 LRRC57Q8N9N7 239 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 GIPC2Q8TF65 315 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 DNAI1Q9UI46 699 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 TMEM59LQ9UK28 342 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 USP3Q9Y6I4 520 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 EPOPA6NHQ4 379 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 ALDH1A3P47895 512 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 PM20D1Q6GTS8 502 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 C11orf63Q6NUN7 778 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 SYCE1Q8N0S2 351 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 SCML4Q8N228 414 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 KHSRPQ92945 711 aaKnown RBP eCLIP18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 LMAN2LQ9H0V9 348 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 FBXO44Q9H4M3 255 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 IP6K2Q9UHH9 426 aa18.69■□□□□ 0.58
PTCHD3-202ENST00000622555 SLC38A8A6NNN8 435 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 YJEFN3A6XGL0 299 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 E7ENQ6 273 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 RIOK3O14730 519 aaKnown RBP18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 HSF2BPO75031 334 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 RTN3O95197 1032 aaPredicted RBP18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 FTCDO95954 541 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 USP46P62068 366 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 OGDHQ02218 1023 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 PTPROQ16827 1216 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 LILRA6Q6PI73 481 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 IRGQQ8WZA9 623 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 CEP295NLQ96MC4 621 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 ASNSD1Q9NWL6 643 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 FBXW11Q9UKB1 542 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 INSL5Q9Y5Q6 135 aa18.68■□□□□ 0.58
PTCHD3-202ENST00000622555 CHD7Q9P2D1 2997 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 PDGFRAP16234 1089 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 GPD1P21695 349 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 PSMA2P25787 234 aa18.67■□□□□ 0.58
PTCHD3-202ENST00000622555 YWHAQP27348 245 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms