RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TRIM31Q9BZY9 425 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 FAM114A2Q9NRY5 505 aa22.47■■□□□ 1.19
SPAST-204ENST00000621856 R3HDM2Q9Y2K5 976 aaKnown RBP22.47■■□□□ 1.19
SPAST-204ENST00000621856 hCG_1818297A0A087WSY0 165 aa22.46■■□□□ 1.19
SPAST-204ENST00000621856 TRAPPC3O43617 180 aa22.46■■□□□ 1.19
SPAST-204ENST00000621856 KDELR1P24390 212 aa22.46■■□□□ 1.19
SPAST-204ENST00000621856 CDKN2BP42772 138 aa22.46■■□□□ 1.19
SPAST-204ENST00000621856 MAPRE1Q15691 268 aaKnown RBP22.46■■□□□ 1.19
SPAST-204ENST00000621856 ARCQ7LC44 396 aa22.46■■□□□ 1.19
SPAST-204ENST00000621856 OR10T2Q8NGX3 314 aa22.46■■□□□ 1.19
SPAST-204ENST00000621856 FAM149B1Q96BN6 582 aa22.46■■□□□ 1.19
SPAST-204ENST00000621856 PEBP4Q96S96 227 aa22.46■■□□□ 1.19
SPAST-204ENST00000621856 NRDE2Q9H7Z3 1164 aa22.46■■□□□ 1.19
SPAST-204ENST00000621856 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.46■■□□□ 1.19
SPAST-204ENST00000621856 TTC3P53804 2025 aa22.46■■□□□ 1.19
SPAST-204ENST00000621856 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.45■■□□□ 1.19
SPAST-204ENST00000621856 MAP2K7O14733 419 aa22.45■■□□□ 1.19
SPAST-204ENST00000621856 HSF2BPO75031 334 aa22.45■■□□□ 1.19
SPAST-204ENST00000621856 ECEL1O95672 775 aa22.45■■□□□ 1.19
SPAST-204ENST00000621856 PTPN9P43378 593 aa22.45■■□□□ 1.19
SPAST-204ENST00000621856 TKTL1P51854 596 aa22.45■■□□□ 1.19
SPAST-204ENST00000621856 RABGGTBP53611 331 aa22.45■■□□□ 1.19
SPAST-204ENST00000621856 MRPS5P82675 430 aaKnown RBP22.45■■□□□ 1.19
SPAST-204ENST00000621856 ADCY1Q08828 1119 aa22.45■■□□□ 1.19
SPAST-204ENST00000621856 RAB6CQ53S08 254 aa22.45■■□□□ 1.19
SPAST-204ENST00000621856 C1orf53Q5VUE5 145 aa22.45■■□□□ 1.19
SPAST-204ENST00000621856 NPAS4Q8IUM7 802 aa22.45■■□□□ 1.19
SPAST-204ENST00000621856 EIF1ADQ8N9N8 165 aaKnown RBP22.45■■□□□ 1.19
SPAST-204ENST00000621856 NDRG1Q92597 394 aaKnown RBP22.45■■□□□ 1.19
SPAST-204ENST00000621856 TMEM209Q96SK2 561 aa22.45■■□□□ 1.19
SPAST-204ENST00000621856 RAB6CQ9H0N0 254 aa22.45■■□□□ 1.19
SPAST-204ENST00000621856 CEP350Q5VT06 3117 aa22.45■■□□□ 1.18
SPAST-204ENST00000621856 C3orf70A6NLC5 250 aaPredicted RBP22.45■■□□□ 1.18
SPAST-204ENST00000621856 NDUFV1P49821 464 aa22.45■■□□□ 1.18
SPAST-204ENST00000621856 CACNA2D1P54289 1103 aa22.45■■□□□ 1.18
SPAST-204ENST00000621856 CCNG2Q16589 344 aa22.45■■□□□ 1.18
SPAST-204ENST00000621856 GRK7Q8WTQ7 553 aa22.45■■□□□ 1.18
SPAST-204ENST00000621856 CCDC114Q96M63 670 aa22.45■■□□□ 1.18
SPAST-204ENST00000621856 KCNK16Q96T55 309 aa22.45■■□□□ 1.18
SPAST-204ENST00000621856 RHOBTB2Q9BYZ6 727 aa22.45■■□□□ 1.18
SPAST-204ENST00000621856 TMEM39AQ9NV64 488 aa22.45■■□□□ 1.18
SPAST-204ENST00000621856 TMLHEQ9NVH6 421 aa22.45■■□□□ 1.18
SPAST-204ENST00000621856 DAB1O75553 588 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 FBXO21O94952 628 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 BDNFP23560 247 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 BCAR1P56945 870 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 PPP1R7Q15435 360 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 DUPD1Q68J44 220 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 ZMIZ2Q8NF64 920 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 CMASQ8NFW8 434 aaPredicted RBP22.44■■□□□ 1.18
SPAST-204ENST00000621856 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.44■■□□□ 1.18
SPAST-204ENST00000621856 SEC14L1Q92503 715 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 CAVIN3Q969G5 261 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 ARMC5Q96C12 935 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 PKMYT1Q99640 499 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 FAM118BQ9BPY3 351 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 DDX23Q9BUQ8 820 aaKnown RBP22.44■■□□□ 1.18
SPAST-204ENST00000621856 COLEC11Q9BWP8 271 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 MRPL9Q9BYD2 267 aaKnown RBP22.44■■□□□ 1.18
SPAST-204ENST00000621856 ULBP1Q9BZM6 244 aa22.44■■□□□ 1.18
SPAST-204ENST00000621856 SPDYE4A6NLX3 237 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 TBKBP1A7MCY6 615 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 NRP1O14786 923 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 HSPA8P11142 646 aaKnown RBP22.43■■□□□ 1.18
SPAST-204ENST00000621856 ADCY2Q08462 1091 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 NNTQ13423 1086 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 LRRTM3Q86VH5 581 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 DEFB106AQ8N104 65 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 CALN1Q9BXU9 219 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 UBXN6Q9BZV1 441 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.43■■□□□ 1.18
SPAST-204ENST00000621856 TMEM30AQ9NV96 361 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 OGFRQ9NZT2 677 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 TBX21Q9UL17 535 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 MICAL3Q7RTP6 2002 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 ALDH2P05091 517 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 FAM153BP0C7A2 387 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 TFE3P19532 575 aaPredicted RBP22.43■■□□□ 1.18
SPAST-204ENST00000621856 MATKP42679 507 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 GJA8P48165 433 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 KRT81Q14533 505 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 FAM153CQ494X1 144 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 BOLA3Q53S33 107 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 CYP4V2Q6ZWL3 525 aaPredicted RBP22.43■■□□□ 1.18
SPAST-204ENST00000621856 GPRIN1Q7Z2K8 1008 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 RFX6Q8HWS3 928 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 SPATA2LQ8IUW3 424 aaPredicted RBP22.43■■□□□ 1.18
SPAST-204ENST00000621856 ANKLE1Q8NAG6 615 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 ATL2Q8NHH9 583 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 SLCO2A1Q92959 643 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 ACBD3Q9H3P7 528 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 CSNK1G1Q9HCP0 422 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 DMAP1Q9NPF5 467 aaPredicted RBP22.43■■□□□ 1.18
SPAST-204ENST00000621856 FAM153AQ9UHL3 310 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 FEZ2Q9UHY8 353 aaPredicted RBP22.43■■□□□ 1.18
SPAST-204ENST00000621856 ADAM28Q9UKQ2 775 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 EFR3BQ9Y2G0 817 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 FAN1Q9Y2M0 1017 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 SNX24Q9Y343 169 aa22.43■■□□□ 1.18
SPAST-204ENST00000621856 CD48P09326 243 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms