RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 FGGP02679 453 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 LINC00271P0C7V0 271 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 GSCP56915 257 aaPredicted RBP16.69■□□□□ 0.26
CBWD3-216ENST00000621396 MRPS5P82675 430 aaKnown RBP16.69■□□□□ 0.26
CBWD3-216ENST00000621396 DCAF6Q58WW2 860 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 C4orf50Q6ZRC1 276 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 HERC6Q8IVU3 1022 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 VPS52Q8N1B4 723 aa16.69■□□□□ 0.26
CBWD3-216ENST00000621396 RNF25Q96BH1 459 aaPredicted RBP16.69■□□□□ 0.26
CBWD3-216ENST00000621396 SEPT5Q99719 369 aaPredicted RBP16.69■□□□□ 0.26
CBWD3-216ENST00000621396 LBHD1Q9BQE6 289 aaPredicted RBP16.69■□□□□ 0.26
CBWD3-216ENST00000621396 WDR27A2RRH5 827 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 CTAGE15A4D2H0 777 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 ARHGEF15O94989 841 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 EFEMP2O95967 443 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 CTAGE8P0CG41 777 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 GPD1P21695 349 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 ELAVL2Q12926 359 aaKnown RBP16.68■□□□□ 0.26
CBWD3-216ENST00000621396 PIGHQ14442 188 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-216ENST00000621396 MAPRE1Q15691 268 aaKnown RBP16.68■□□□□ 0.26
CBWD3-216ENST00000621396 PSMD5Q16401 504 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 MGAT5BQ3V5L5 792 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 SCYL2Q6P3W7 929 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 ANKS3Q6ZW76 656 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 CTAGE6Q86UF2 777 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 CTAGE4Q8IX94 777 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 DCP1BQ8IZD4 617 aaKnown RBP16.68■□□□□ 0.26
CBWD3-216ENST00000621396 SPATA18Q8TC71 538 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 HERPUD2Q9BSE4 406 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 HTATIP2Q9BUP3 242 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 MAGEB5Q9BZ81 275 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 CHST7Q9NS84 486 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 RBM12Q9NTZ6 932 aaKnown RBP16.68■□□□□ 0.26
CBWD3-216ENST00000621396 NAALADL1Q9UQQ1 740 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 TBC1D4O60343 1298 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 TADA3O75528 432 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 SLC1A1P43005 524 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 ACADSBP45954 432 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 ZNF143P52747 638 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-216ENST00000621396 SLC5A3P53794 718 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 TAP1Q03518 808 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 CFAP221Q4G0U5 840 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 PSRC1Q6PGN9 363 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-216ENST00000621396 FAM43BQ6ZT52 329 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-216ENST00000621396 DEFB106AQ8N104 65 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 FIBCD1Q8N539 461 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 SPATA4Q8NEY3 305 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 KCTD13Q8WZ19 329 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 CLSTN3Q9BQT9 956 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 HEMGNQ9BXL5 484 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 ALG13Q9NP73 1137 aaKnown RBP16.68■□□□□ 0.26
CBWD3-216ENST00000621396 SPG21Q9NZD8 308 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 NUDT5Q9UKK9 219 aa16.68■□□□□ 0.26
CBWD3-216ENST00000621396 CCDC66A2RUB6 948 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 MTMR11A4FU01 709 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 MIF4GDA9UHW6 222 aaKnown RBP16.67■□□□□ 0.26
CBWD3-216ENST00000621396 MIPP30301 263 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 RWDD2BP57060 319 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 ROR1Q01973 937 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 MTMR3Q13615 1198 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 SLC26A9Q7LBE3 791 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 CCDC50Q8IVM0 306 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 RNF168Q8IYW5 571 aaPredicted RBP16.67■□□□□ 0.26
CBWD3-216ENST00000621396 CEP112Q8N8E3 955 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 FAM172AQ8WUF8 416 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 PEBP4Q96S96 227 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 INSL6Q9Y581 213 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 TRANK1O15050 2925 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 FGF18O76093 207 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 ZBED1O96006 694 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 SOD2P04179 222 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 FYNP06241 537 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 RHOXF2BP0C7M4 288 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 SPATA31D3P0C874 917 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 LAG3P18627 525 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 PAFAH1B1P43034 410 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 DAOAP59103 153 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 USP46P62068 366 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 YWHAZP63104 245 aaKnown RBP16.67■□□□□ 0.26
CBWD3-216ENST00000621396 HTRA4P83105 476 aaPredicted RBP16.67■□□□□ 0.26
CBWD3-216ENST00000621396 ELF2Q15723 593 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 RAB41Q5JT25 222 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 SPATA31D4Q6ZUB0 917 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 RHOT1Q8IXI2 618 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 ZDHHC14Q8IZN3 488 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 KLHL23Q8NBE8 558 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 RAPGEF5Q92565 580 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 RHOXF2Q9BQY4 288 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 PCDHB5Q9Y5E4 795 aa16.67■□□□□ 0.26
CBWD3-216ENST00000621396 NLRC5Q86WI3 1866 aa16.66■□□□□ 0.26
CBWD3-216ENST00000621396 SDC4P31431 198 aa16.66■□□□□ 0.26
CBWD3-216ENST00000621396 GIPC2Q8TF65 315 aa16.66■□□□□ 0.26
CBWD3-216ENST00000621396 HERVK_113Q902F9 699 aa16.66■□□□□ 0.26
CBWD3-216ENST00000621396 HSPH1Q92598 858 aa16.66■□□□□ 0.26
CBWD3-216ENST00000621396 PBKQ96KB5 322 aa16.66■□□□□ 0.26
CBWD3-216ENST00000621396 CALR3Q96L12 384 aaKnown RBP16.66■□□□□ 0.26
CBWD3-216ENST00000621396 FAM118BQ9BPY3 351 aa16.66■□□□□ 0.26
CBWD3-216ENST00000621396 CARD9Q9H257 536 aa16.66■□□□□ 0.26
CBWD3-216ENST00000621396 TMPRSS4Q9NRS4 437 aa16.66■□□□□ 0.26
CBWD3-216ENST00000621396 OR6C75A6NL08 312 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms