RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 FTHL17Q9BXU8 183 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 ZCCHC2Q9C0B9 1178 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 PXDNLA1KZ92 1463 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 CCDC22O60826 627 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 VIL1P09327 827 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 SHMT1P34896 483 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 FDFT1P37268 417 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 CENPAP49450 140 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 FXR1P51114 621 aaKnown RBP eCLIP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 TBX4P57082 545 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 REXO1L1PQ8IX06 675 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 KRT78Q8N1N4 520 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 OSCP1Q8WVF1 389 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 BTN2A2Q8WVV5 523 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 PHF21AQ96BD5 680 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 PDGFCQ9NRA1 345 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 AMACRQ9UHK6 382 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 NFASCO94856 1347 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 UMODL1Q5DID0 1318 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 H0Y3Z8 333 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 MED24O75448 989 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 HOXA10P31260 410 aaPredicted RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 NBPF20Q3BBV1 942 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 C10orf53Q8N6V4 93 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 PDGFDQ9GZP0 370 aaPredicted RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 WARS2Q9UGM6 360 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 APPL1Q9UKG1 709 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 NEU2Q9Y3R4 380 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 SNCAIPQ9Y6H5 919 aa10.14□□□□□ -0.79
CLTCL1-211ENST00000621271 ZNF185O15231 689 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 ADH1AP07327 375 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 CTSEP14091 401 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 PPM1AP35813 382 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 ZNF200P98182 395 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 NAB2Q15742 525 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 GJC2Q5T442 439 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 RIOX2Q8IUF8 465 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 MYO1HQ8N1T3 1032 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 TRIML2Q8N7C3 387 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 TMA16Q96EY4 203 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 TMEM176AQ96HP8 235 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 ELOVL4Q9GZR5 314 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 BATF3Q9NR55 127 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 PRDM4Q9UKN5 801 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 NRCAMQ92823 1304 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 TSPAN3O60637 253 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 PHF2O75151 1096 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 LGALS2P05162 132 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 APOA4P06727 396 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 IL10P22301 178 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 PSMA3P25788 255 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 SCNN1BP51168 640 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 MAP3K10Q02779 954 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 C1orf146Q5VVC0 180 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 LRIG3Q6UXM1 1119 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 SH2D3CQ8N5H7 860 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 VMP1Q96GC9 406 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 SMARCD1Q96GM5 515 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 NLNQ9BYT8 704 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 CCDC90BQ9GZT6 254 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 WWP1Q9H0M0 922 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 DMAP1Q9NPF5 467 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 SPG21Q9NZD8 308 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 KPNA3O00505 521 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 FKBP9O95302 570 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 FAM107AO95990 144 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 KRT16P08779 473 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 FGFR1P11362 822 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 POLR2EP19388 210 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 ITIH2P19823 946 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 GPC1P35052 558 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 NUMBP49757 651 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 FLOT2Q14254 428 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 FKBP9P1Q75LS8 142 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 PRUNE1Q86TP1 453 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 PPP1R36Q96LQ0 422 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 ASAH2Q9NR71 780 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 NDOR1Q9UHB4 597 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 VPS51Q9UID3 782 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 CHMP2BQ9UQN3 213 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 RBAK-RBAKDNI3L0D1 243 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 ADCY6O43306 1168 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 ATMINO43313 823 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 TMEM253P0C7T8 217 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 MLNP12872 115 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 PTPN7P35236 360 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 CNTN1Q12860 1018 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 FAM83EQ2M2I3 478 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 SLC39A12Q504Y0 691 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 GPR142Q7Z601 462 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 FAM172AQ8WUF8 416 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 TGS1Q96RS0 853 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 IL25Q9H293 177 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 ZNF556Q9HAH1 456 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 ETNK1Q9HBU6 452 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 ATP13A1Q9HD20 1204 aa10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 A1CFQ9NQ94 594 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 H2AFY2Q9P0M6 372 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-211ENST00000621271 PHF20L1A8MW92 1017 aa10.12□□□□□ -0.79
CLTCL1-211ENST00000621271 TNNI3P19429 210 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms