RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 RIF1Q5UIP0 2472 aaKnown RBP21.73■■□□□ 1.07
SMC6-210ENST00000621152 SCAMP3O14828 347 aaKnown RBP21.72■■□□□ 1.07
SMC6-210ENST00000621152 RNF40O75150 1001 aa21.72■■□□□ 1.07
SMC6-210ENST00000621152 INCA1Q0VD86 236 aa21.72■■□□□ 1.07
SMC6-210ENST00000621152 LPAL2Q16609 132 aa21.72■■□□□ 1.07
SMC6-210ENST00000621152 ANKRD40Q6AI12 368 aa21.72■■□□□ 1.07
SMC6-210ENST00000621152 PRR23BQ6ZRT6 265 aa21.72■■□□□ 1.07
SMC6-210ENST00000621152 SEMA4DQ92854 862 aa21.72■■□□□ 1.07
SMC6-210ENST00000621152 HNRNPABQ99729 332 aaKnown RBP21.72■■□□□ 1.07
SMC6-210ENST00000621152 NIF3L1Q9GZT8 377 aa21.72■■□□□ 1.07
SMC6-210ENST00000621152 GMIPQ9P107 970 aa21.72■■□□□ 1.07
SMC6-210ENST00000621152 SLC8A2Q9UPR5 921 aa21.72■■□□□ 1.07
SMC6-210ENST00000621152 PTPRDP23468 1912 aa21.72■■□□□ 1.07
SMC6-210ENST00000621152 ANAPC1Q9H1A4 1944 aa21.72■■□□□ 1.07
SMC6-210ENST00000621152 VPS13AQ96RL7 3174 aa21.72■■□□□ 1.07
SMC6-210ENST00000621152 SLC9A3R1O14745 358 aaPredicted RBP21.71■■□□□ 1.07
SMC6-210ENST00000621152 COCHO43405 550 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 STX10O60499 249 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 FAM200BP0CF97 657 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 ID4P47928 161 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 SIM2Q14190 667 aaPredicted RBP21.71■■□□□ 1.07
SMC6-210ENST00000621152 FBXO43Q4G163 708 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 SNX30Q5VWJ9 437 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 ISM2Q6H9L7 571 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 KIAA1958Q8N8K9 716 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 SPATA20Q8TB22 786 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 WHAMMQ8TF30 809 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 DNAI2Q9GZS0 605 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 FBXO44Q9H4M3 255 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 RAB20Q9NX57 234 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 FAM186AA6NE01 2351 aa21.71■■□□□ 1.07
SMC6-210ENST00000621152 FAM92AA1XBS5 289 aa21.7■■□□□ 1.06
SMC6-210ENST00000621152 CILPO75339 1184 aa21.7■■□□□ 1.06
SMC6-210ENST00000621152 ZDHHC11BP0C7U3 371 aa21.7■■□□□ 1.06
SMC6-210ENST00000621152 HOXA6P31267 233 aa21.7■■□□□ 1.06
SMC6-210ENST00000621152 CNR2P34972 360 aa21.7■■□□□ 1.06
SMC6-210ENST00000621152 FKBP3Q00688 224 aaKnown RBP21.7■■□□□ 1.06
SMC6-210ENST00000621152 SRSF5Q13243 272 aaKnown RBP21.7■■□□□ 1.06
SMC6-210ENST00000621152 ZNF394Q53GI3 561 aa21.7■■□□□ 1.06
SMC6-210ENST00000621152 COBLL1Q53SF7 1204 aa21.7■■□□□ 1.06
SMC6-210ENST00000621152 TCERG1LQ5VWI1 586 aa21.7■■□□□ 1.06
SMC6-210ENST00000621152 DDX42Q86XP3 938 aaKnown RBP eCLIP21.7■■□□□ 1.06
SMC6-210ENST00000621152 FBXL13Q8NEE6 735 aa21.7■■□□□ 1.06
SMC6-210ENST00000621152 HEXIM2Q96MH2 286 aaKnown RBP21.7■■□□□ 1.06
SMC6-210ENST00000621152 GTPBP4Q9BZE4 634 aaKnown RBP21.7■■□□□ 1.06
SMC6-210ENST00000621152 CCSER2Q9H7U1 834 aa21.7■■□□□ 1.06
SMC6-210ENST00000621152 POLR3BQ9NW08 1133 aaPredicted RBP21.7■■□□□ 1.06
SMC6-210ENST00000621152 PXNP49023 591 aaPredicted RBP21.69■■□□□ 1.06
SMC6-210ENST00000621152 PGFP49763 221 aa21.69■■□□□ 1.06
SMC6-210ENST00000621152 MXI1P50539 228 aa21.69■■□□□ 1.06
SMC6-210ENST00000621152 PMS1P54277 932 aaKnown RBP21.69■■□□□ 1.06
SMC6-210ENST00000621152 DHCR24Q15392 516 aa21.69■■□□□ 1.06
SMC6-210ENST00000621152 EZH1Q92800 747 aaPredicted RBP21.69■■□□□ 1.06
SMC6-210ENST00000621152 TATDN2Q93075 761 aa21.69■■□□□ 1.06
SMC6-210ENST00000621152 JAKMIP2Q96AA8 810 aa21.69■■□□□ 1.06
SMC6-210ENST00000621152 NACA2Q9H009 215 aa21.69■■□□□ 1.06
SMC6-210ENST00000621152 TBC1D14Q9P2M4 693 aa21.69■■□□□ 1.06
SMC6-210ENST00000621152 GMEB2Q9UKD1 530 aa21.69■■□□□ 1.06
SMC6-210ENST00000621152 DMDP11532 3685 aa21.69■■□□□ 1.06
SMC6-210ENST00000621152 E2F8A0AVK6 867 aa21.68■■□□□ 1.06
SMC6-210ENST00000621152 OPRD1P41143 372 aa21.68■■□□□ 1.06
SMC6-210ENST00000621152 RHBDF2Q6PJF5 856 aa21.68■■□□□ 1.06
SMC6-210ENST00000621152 CLEC20AQ6ZU45 233 aa21.68■■□□□ 1.06
SMC6-210ENST00000621152 WDR5BQ86VZ2 330 aa21.68■■□□□ 1.06
SMC6-210ENST00000621152 GPR161Q8N6U8 529 aaKnown RBP21.68■■□□□ 1.06
SMC6-210ENST00000621152 RPLP0P6Q8NHW5 317 aa21.68■■□□□ 1.06
SMC6-210ENST00000621152 TLR8Q9NR97 1041 aaKnown RBP21.68■■□□□ 1.06
SMC6-210ENST00000621152 SH3BP1Q9Y3L3 701 aa21.68■■□□□ 1.06
SMC6-210ENST00000621152 TRIM49BA6NDI0 452 aa21.67■■□□□ 1.06
SMC6-210ENST00000621152 HHLA1C9JL84 531 aa21.67■■□□□ 1.06
SMC6-210ENST00000621152 CYP17A1P05093 508 aa21.67■■□□□ 1.06
SMC6-210ENST00000621152 ACO1P21399 889 aaKnown RBP21.67■■□□□ 1.06
SMC6-210ENST00000621152 SLC6A11P48066 632 aa21.67■■□□□ 1.06
SMC6-210ENST00000621152 TUBP50607 506 aa21.67■■□□□ 1.06
SMC6-210ENST00000621152 GAB4Q2WGN9 574 aa21.67■■□□□ 1.06
SMC6-210ENST00000621152 DCAF17Q5H9S7 520 aaPredicted RBP21.67■■□□□ 1.06
SMC6-210ENST00000621152 LAIR1Q6GTX8 287 aa21.67■■□□□ 1.06
SMC6-210ENST00000621152 CEP68Q76N32 757 aa21.67■■□□□ 1.06
SMC6-210ENST00000621152 GPRIN1Q7Z2K8 1008 aa21.67■■□□□ 1.06
SMC6-210ENST00000621152 ELOA2Q8IYF1 753 aaPredicted RBP21.67■■□□□ 1.06
SMC6-210ENST00000621152 FAXDC2Q96IV6 333 aa21.67■■□□□ 1.06
SMC6-210ENST00000621152 ZFRQ96KR1 1074 aaKnown RBP21.67■■□□□ 1.06
SMC6-210ENST00000621152 MAN1B1Q9UKM7 699 aa21.67■■□□□ 1.06
SMC6-210ENST00000621152 SCML2Q9UQR0 700 aa21.67■■□□□ 1.06
SMC6-210ENST00000621152 SLC16A3O15427 465 aaKnown RBP21.66■■□□□ 1.06
SMC6-210ENST00000621152 TLR5O60602 858 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 TBX18O95935 607 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 LRRC63Q05C16 580 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 STIM1Q13586 685 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 CBWD6Q4V339 395 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 CBWD3Q5JTY5 395 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 CBWD5Q5RIA9 395 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 PPP1R26Q5T8A7 1209 aaPredicted RBP21.66■■□□□ 1.06
SMC6-210ENST00000621152 ZC3H3Q8IXZ2 948 aaKnown RBP21.66■■□□□ 1.06
SMC6-210ENST00000621152 TTC39CQ8N584 583 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 CAMKK1Q8N5S9 505 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 CCDC26Q8TAB7 109 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 RMDN1Q96DB5 314 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 TMEM176AQ96HP8 235 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 DHTKD1Q96HY7 919 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms