RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 LAMC1P11047 1609 aa6.2□□□□□ -1.42
VPS29-212ENST00000621131 CLTCL1P53675 1640 aa6.2□□□□□ -1.42
VPS29-212ENST00000621131 ZNF804BA4D1E1 1349 aa6.2□□□□□ -1.42
VPS29-212ENST00000621131 ABCC3O15438 1527 aa6.2□□□□□ -1.42
VPS29-212ENST00000621131 CNTLNQ9NXG0 1405 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 TRPM1Q7Z4N2 1603 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 hCG_2014768A0A024R1R8 64 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 MYO1FO00160 1098 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 TOM1O60784 492 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 TJP3O95049 919 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 PRR35P0CG20 571 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 HSPA6P17066 643 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 PDE1AP54750 535 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 WNT3P56703 355 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 ANAPC15P60006 121 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 TUBA4AP68366 448 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 CYP4F2P78329 520 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 MYO1EQ12965 1108 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 PRAMEF17Q5VTA0 474 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 LRRC71Q8N4P6 559 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 NT5C1BQ96P26 610 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 ACO2Q99798 780 aaKnown RBP6.19□□□□□ -1.42
VPS29-212ENST00000621131 TRIM54Q9BYV2 358 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 CXorf36Q9H7Y0 433 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 ADAMTS5Q9UNA0 930 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 ZNF142P52746 1687 aaPredicted RBP6.19□□□□□ -1.42
VPS29-212ENST00000621131 AGLP35573 1532 aa6.19□□□□□ -1.42
VPS29-212ENST00000621131 ROCK2O75116 1388 aaKnown RBP6.18□□□□□ -1.42
VPS29-212ENST00000621131 A0A087WWL8 130 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 PRRT4C9JH25 899 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 RFPL1O75677 317 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 CENPBP07199 599 aaPredicted RBP6.18□□□□□ -1.42
VPS29-212ENST00000621131 HSPA5P11021 654 aaKnown RBP6.18□□□□□ -1.42
VPS29-212ENST00000621131 XRCC6P12956 609 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS29-212ENST00000621131 NPR1P16066 1061 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 DGKEP52429 567 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 HOXA4Q00056 320 aaPredicted RBP6.18□□□□□ -1.42
VPS29-212ENST00000621131 GTF2H3Q13889 308 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 MTX3Q5HYI7 312 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 Q6ZWC4 215 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 GAS2L3Q86XJ1 694 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 SLC15A4Q8N697 577 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 DNAJC5GQ8N7S2 189 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 KBTBD7Q8WVZ9 684 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 R3HDM4Q96D70 268 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 TAAR9Q96RI9 348 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 MACROD1Q9BQ69 325 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 THAP7Q9BT49 309 aaPredicted RBP6.18□□□□□ -1.42
VPS29-212ENST00000621131 DPH1Q9BZG8 443 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 NMRK2Q9NPI5 230 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 GABRQQ9UN88 632 aa6.18□□□□□ -1.42
VPS29-212ENST00000621131 PRAG1Q86YV5 1406 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 KIAA1210Q9ULL0 1709 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 SMIM22K7EJ46 135 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 KELP23276 732 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 MPGP29372 298 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 AGFG1P52594 562 aaKnown RBP6.17□□□□□ -1.42
VPS29-212ENST00000621131 CTBP1Q13363 440 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 TBC1D25Q3MII6 688 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 ZNF626Q68DY1 528 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 C11orf87Q6NUJ2 197 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 NAPRTQ6XQN6 538 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 EPM2AIP1Q7L775 607 aaPredicted RBP6.17□□□□□ -1.42
VPS29-212ENST00000621131 DAAM2Q86T65 1068 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 SOCS4Q8WXH5 440 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 LRGUKQ96M69 825 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 CDH19Q9H159 772 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 ANLNQ9NQW6 1124 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.17□□□□□ -1.42
VPS29-212ENST00000621131 BTBD3Q9Y2F9 522 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 CFAP65Q6ZU64 1925 aaKnown RBP6.17□□□□□ -1.42
VPS29-212ENST00000621131 USP47Q96K76 1375 aa6.17□□□□□ -1.42
VPS29-212ENST00000621131 ARHGAP31Q2M1Z3 1444 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 MYOM2P54296 1465 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 MYO1CO00159 1063 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 BTN3A1O00481 513 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 ADAMTS3O15072 1205 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 ANP32CO43423 234 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 NPSP0C0P6 89 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 KCNA3P22001 575 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 CERS1P27544 350 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 ADORA2AP29274 412 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 PDE6CP51160 858 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 IGBP1P78318 339 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 CEP78Q5JTW2 689 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 NEK8Q86SG6 692 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 CHSY1Q86X52 802 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 COL23A1Q86Y22 540 aaPredicted RBP6.16□□□□□ -1.42
VPS29-212ENST00000621131 SLC15A3Q8IY34 581 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 ABRAQ8N0Z2 381 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 FAM177A1Q8N128 213 aaPredicted RBP6.16□□□□□ -1.42
VPS29-212ENST00000621131 XAGE5Q8WWM1 108 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 QTRT1Q9BXR0 403 aaKnown RBP6.16□□□□□ -1.42
VPS29-212ENST00000621131 ZMAT3Q9HA38 289 aaKnown RBP6.16□□□□□ -1.42
VPS29-212ENST00000621131 SMURF2Q9HAU4 748 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 ATP6V0A4Q9HBG4 840 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 EIF3AQ14152 1382 aaKnown RBP6.16□□□□□ -1.42
VPS29-212ENST00000621131 IFT172Q9UG01 1749 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 NPATQ14207 1427 aa6.16□□□□□ -1.42
VPS29-212ENST00000621131 EP400Q96L91 3159 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms