RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 KCNF1Q9H3M0 494 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 KIF9Q9HAQ2 790 aa17.11■□□□□ 0.33
CD40-207ENST00000620709 NXF1Q9UBU9 619 aaKnown RBP17.11■□□□□ 0.33
CD40-207ENST00000620709 GPR179Q6PRD1 2367 aa17.1■□□□□ 0.33
CD40-207ENST00000620709 NRDCO43847 1150 aa17.1■□□□□ 0.33
CD40-207ENST00000620709 USP17L7P0C7H9 530 aa17.1■□□□□ 0.33
CD40-207ENST00000620709 MAGEA11P43364 429 aa17.1■□□□□ 0.33
CD40-207ENST00000620709 CASP4P49662 377 aa17.1■□□□□ 0.33
CD40-207ENST00000620709 DMWDQ09019 674 aa17.1■□□□□ 0.33
CD40-207ENST00000620709 BIRC3Q13489 604 aa17.1■□□□□ 0.33
CD40-207ENST00000620709 MAPRE1Q15691 268 aaKnown RBP17.1■□□□□ 0.33
CD40-207ENST00000620709 WDR72Q3MJ13 1102 aa17.1■□□□□ 0.33
CD40-207ENST00000620709 ARL14EPQ8N8R7 260 aaPredicted RBP17.1■□□□□ 0.33
CD40-207ENST00000620709 ZNF516Q92618 1163 aa17.1■□□□□ 0.33
CD40-207ENST00000620709 TRMT2BQ96GJ1 504 aaKnown RBP17.1■□□□□ 0.33
CD40-207ENST00000620709 ZNF830Q96NB3 372 aaPredicted RBP17.1■□□□□ 0.33
CD40-207ENST00000620709 HPS4Q9NQG7 708 aa17.1■□□□□ 0.33
CD40-207ENST00000620709 ABL1P00519 1130 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 TDGF1P13385 188 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 MSNP26038 577 aaKnown RBP17.09■□□□□ 0.33
CD40-207ENST00000620709 MYL6P60660 151 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 GRSF1Q12849 480 aaKnown RBP eCLIP17.09■□□□□ 0.33
CD40-207ENST00000620709 IFRD2Q12894 506 aaPredicted RBP17.09■□□□□ 0.33
CD40-207ENST00000620709 ARID5BQ14865 1188 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 MTF1Q14872 753 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 MAMSTRQ6ZN01 415 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 RIN3Q8TB24 985 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 RMDN1Q96DB5 314 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 PCED1BQ96HM7 432 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 MYRFLQ96LU7 910 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 SLC22A12Q96S37 553 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 FAM83CQ9BQN1 747 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 DUS2Q9NX74 493 aaKnown RBP17.09■□□□□ 0.33
CD40-207ENST00000620709 GMEB2Q9UKD1 530 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 USP18Q9UMW8 372 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 DCHS1Q96JQ0 3298 aa17.09■□□□□ 0.33
CD40-207ENST00000620709 C2orf78A6NCI8 922 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 OTOL1A6NHN0 477 aaPredicted RBP17.08■□□□□ 0.32
CD40-207ENST00000620709 A8MXQ7 604 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 ESPNB1AK53 854 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 AKR1B15C9JRZ8 316 aaPredicted RBP17.08■□□□□ 0.32
CD40-207ENST00000620709 MAPK13O15264 365 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 IFNAR2P48551 515 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 SRSF5Q13243 272 aaKnown RBP17.08■□□□□ 0.32
CD40-207ENST00000620709 SYCP1Q15431 976 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 DCAF17Q5H9S7 520 aaPredicted RBP17.08■□□□□ 0.32
CD40-207ENST00000620709 VSTM1Q6UX27 236 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 LIMS2Q7Z4I7 341 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 MYCBPAPQ8TBZ2 947 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 ELMO3Q96BJ8 720 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 IQCDQ96DY2 449 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 NUP58Q9BVL2 599 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 DPEP3Q9H4B8 488 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 C2orf42Q9NWW7 574 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 WNT6Q9Y6F9 365 aa17.08■□□□□ 0.32
CD40-207ENST00000620709 SOBPA7XYQ1 873 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 AFPP02771 609 aaKnown RBP17.07■□□□□ 0.32
CD40-207ENST00000620709 GYPCP04921 128 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 PTPN1P18031 435 aaKnown RBP17.07■□□□□ 0.32
CD40-207ENST00000620709 HDCP19113 662 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 USP46P62068 366 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 AMPD2Q01433 879 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 KCNH2Q12809 1159 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 LRMPQ12912 555 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 CCINQ13939 588 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 SIM2Q14190 667 aaPredicted RBP17.07■□□□□ 0.32
CD40-207ENST00000620709 ZNF268Q14587 947 aaPredicted RBP17.07■□□□□ 0.32
CD40-207ENST00000620709 PDGFRLQ15198 375 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 SCARA5Q6ZMJ2 495 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 DENND5BQ6ZUT9 1274 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 CNGA4Q8IV77 575 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 CPA6Q8N4T0 437 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 CCDC112Q8NEF3 446 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 SPATA17Q96L03 361 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 PCMTD1Q96MG8 357 aaPredicted RBP17.07■□□□□ 0.32
CD40-207ENST00000620709 TRPM5Q9NZQ8 1165 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 NME7Q9Y5B8 376 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 ATG2BQ96BY7 2078 aa17.07■□□□□ 0.32
CD40-207ENST00000620709 F8VP50 259 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 CLDN5O00501 218 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 TRIM66O15016 1216 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 MFAP3LO75121 409 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 TACC1O75410 805 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 KRT13P13646 458 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 HOXC13P31276 330 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 RAP1GAPP47736 663 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 TCERG1LQ5VWI1 586 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 FSTL4Q6MZW2 842 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 INTS8Q75QN2 995 aaKnown RBP17.06■□□□□ 0.32
CD40-207ENST00000620709 TC2NQ8N9U0 490 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 SH3RF2Q8TEC5 729 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 MED10Q9BTT4 135 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.06■□□□□ 0.32
CD40-207ENST00000620709 SIK3Q9Y2K2 1263 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 LRRIQ3A6PVS8 624 aaPredicted RBP17.06■□□□□ 0.32
CD40-207ENST00000620709 EGFP01133 1207 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 TRIM21P19474 475 aaKnown RBP17.06■□□□□ 0.32
CD40-207ENST00000620709 ATICP31939 592 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 GALK1P51570 392 aa17.06■□□□□ 0.32
CD40-207ENST00000620709 CDH8P55286 799 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms