RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ANKDD1AQ495B1 522 aa10.16□□□□□ -0.78
TNFAIP3-210ENST00000620204 LGSNQ5TDP6 509 aa10.16□□□□□ -0.78
TNFAIP3-210ENST00000620204 HOMEZQ8IX15 550 aa10.16□□□□□ -0.78
TNFAIP3-210ENST00000620204 TTC13Q8NBP0 860 aa10.16□□□□□ -0.78
TNFAIP3-210ENST00000620204 CASP10Q92851 521 aa10.16□□□□□ -0.78
TNFAIP3-210ENST00000620204 PRICKLE1Q96MT3 831 aaPredicted RBP10.16□□□□□ -0.78
TNFAIP3-210ENST00000620204 WRNIP1Q96S55 665 aa10.16□□□□□ -0.78
TNFAIP3-210ENST00000620204 UNC45AQ9H3U1 944 aa10.16□□□□□ -0.78
TNFAIP3-210ENST00000620204 KCNK4Q9NYG8 393 aa10.16□□□□□ -0.78
TNFAIP3-210ENST00000620204 HSPBP1Q9NZL4 362 aa10.16□□□□□ -0.78
TNFAIP3-210ENST00000620204 POMPQ9Y244 141 aa10.16□□□□□ -0.78
TNFAIP3-210ENST00000620204 DUOX1Q9NRD9 1551 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 GOLGA8QA0A0J9YX86 632 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 DENND3A2RUS2 1198 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 GOLGA8OA6NCC3 632 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 GOLGA8NF8WBI6 632 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 MSH4O15457 936 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 TCF4P15884 667 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 ZNF24P17028 368 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 HOXD12P35452 270 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 NUDT2P50583 147 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 CDH15P55291 814 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 FLOT2Q14254 428 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 MORF4L2Q15014 288 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 PRKD1Q15139 912 aaPredicted RBP10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 CDHR3Q6ZTQ4 885 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 DPH6Q7L8W6 267 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 METTL25Q8N6Q8 603 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 POMGNT1Q8WZA1 660 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 APOPT1Q96IL0 206 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 CORO1BQ9BR76 489 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 NDEL1Q9GZM8 345 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 TIMMDC1Q9NPL8 285 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 ZNF277Q9NRM2 450 aaPredicted RBP10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 C1orf112Q9NSG2 853 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 RSL24D1Q9UHA3 163 aaKnown RBP10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 ARHGAP26Q9UNA1 814 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 PLA2G4CQ9UP65 541 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 A0A088AWK7 358 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 A0A1B0GTW7 788 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 KBTBD13C9JR72 458 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 ATP9BO43861 1147 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 CRTAMO95727 393 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 PSMC3P17980 439 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 GTF2H1P32780 548 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 HALP42357 657 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 ZNF543Q08ER8 600 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 EML3Q32P44 896 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 TMEM270Q6UE05 265 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 SMYD1Q8NB12 490 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 FNDC8Q8TC99 324 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 AKT1S1Q96B36 256 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 UBAP1Q9NZ09 502 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 IVNS1ABPQ9Y6Y0 642 aa10.15□□□□□ -0.78
TNFAIP3-210ENST00000620204 COL4A1P02462 1669 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 NDUFB5O43674 189 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 BUD23O43709 281 aaKnown RBP10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 LIASO43766 372 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 VARSP26640 1264 aaKnown RBP10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 TSPY1Q01534 308 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 WDR44Q5JSH3 913 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 ANKS1BQ7Z6G8 1248 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 MCOLN2Q8IZK6 566 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 DDHD1Q8NEL9 900 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 TSPAN14Q8NG11 270 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 LRRN4Q8WUT4 740 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 NLRP7Q8WX94 980 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 SEMA4DQ92854 862 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 ZFRQ96KR1 1074 aaKnown RBP10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 SYT11Q9BT88 431 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 KIFC3Q9BVG8 833 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 TRPV6Q9H1D0 765 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 CDH22Q9UJ99 828 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 WDR37Q9Y2I8 494 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 HBS1LQ9Y450 684 aaKnown RBP10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 PCDHB4Q9Y5E5 795 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 WNK3Q9BYP7 1800 aa10.15□□□□□ -0.79
TNFAIP3-210ENST00000620204 TMEM247A6NEH6 219 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 WDR64B1ANS9 1081 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 CST8O60676 142 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 PROSCO94903 275 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 NR1H2P55055 460 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 ZNF568Q3ZCX4 644 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 UGT2A3Q6UWM9 527 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 ACTL9Q8TC94 416 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 MAML3Q96JK9 1138 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 FOXP3Q9BZS1 431 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 ACSS2Q9NR19 701 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 CLRN2A0PK11 232 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 H7C0C1 242 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 hCG_1984214I3L0E3 225 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 ATP5OP48047 213 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 KPNA1P52294 538 aaPredicted RBP10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 OXCT1P55809 520 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 XKR5Q6UX68 686 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 RFX6Q8HWS3 928 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 SP8Q8IXZ3 490 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 PQLC1Q8N2U9 271 aa10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 ZNF713Q8N859 430 aaPredicted RBP10.14□□□□□ -0.79
TNFAIP3-210ENST00000620204 GPAMQ9HCL2 828 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms