RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 MMRN1Q13201 1228 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 TRNP1Q6NT89 227 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 SCYL2Q6P3W7 929 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 TBK1Q9UHD2 729 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 ADCY1Q08828 1119 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 AGBL2Q5U5Z8 902 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 FAM183BPQ6ZVS7 135 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 TAX1BP1Q86VP1 789 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 ACTL9Q8TC94 416 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 CCHCR1Q8TD31 782 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 CFAP57Q96MR6 1250 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 VRTNQ9H8Y1 702 aa20.26■□□□□ 0.83
LAPTM4B-204ENST00000619747 RNF8O76064 485 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 MAP3K6O95382 1288 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 HMGCRP04035 888 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 PDGFRAP16234 1089 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 IGFBP6P24592 240 aaPredicted RBP20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 SNX17Q15036 470 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 CCDC142Q17RM4 750 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 SYCP2LQ5T4T6 812 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 TTC30AQ86WT1 665 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 SNX27Q96L92 541 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 C5orf60A6NFR6 353 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 CCT8L1PA6NM43 557 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 PFKMP08237 780 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 LMO2P25791 158 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 KLRC2P26717 231 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 PSEN2P49810 448 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 OTUD4Q01804 1114 aaKnown RBP20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 RIPK1Q13546 671 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 ZNF268Q14587 947 aaPredicted RBP20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 HADHQ16836 314 aaKnown RBP20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 DCAF4L1Q3SXM0 396 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 FAM133BQ5BKY9 247 aaKnown RBP20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 LRRC38Q5VT99 294 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 LRRN4Q8WUT4 740 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 RXFP2Q8WXD0 754 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 USP18Q9UMW8 372 aa20.25■□□□□ 0.83
LAPTM4B-204ENST00000619747 C3orf70A6NLC5 250 aaPredicted RBP20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 ADORA2BP29275 332 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 NIPA2Q8N8Q9 360 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 ADAM33Q9BZ11 813 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 GPATCH2LQ9NWQ4 482 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 MYADML2A6NDP7 307 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 A8MXQ7 604 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 C6orf222P0C671 652 aaPredicted RBP20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 CREB1P16220 341 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 KDELR1P24390 212 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 GDF10P55107 478 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 INCA1Q0VD86 236 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 KYAT1Q16773 422 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 TRIM68Q6AZZ1 485 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 MRRFQ96E11 262 aaKnown RBP20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 PEBP4Q96S96 227 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 AP5M1Q9H0R1 490 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 ADAM7Q9H2U9 754 aa20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 NGRNQ9NPE2 291 aaKnown RBP20.24■□□□□ 0.83
LAPTM4B-204ENST00000619747 LIN7AO14910 233 aaPredicted RBP20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 SPTLC1O15269 473 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 CCDC130P13994 396 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 SOWAHAQ2M3V2 549 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 ARHGAP22Q7Z5H3 698 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 RFX6Q8HWS3 928 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 MCRS1Q96EZ8 462 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 RBM15Q96T37 977 aaKnown RBP eCLIP20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 DDX56Q9NY93 547 aaKnown RBP20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 SMIM35A0A1B0GVV1 85 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 BANF1O75531 89 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 AUHQ13825 339 aaKnown RBP20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 FASTKD3Q14CZ7 662 aaKnown RBP20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 ANKRD20A2Q5SQ80 823 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 ANKRD20A1Q5TYW2 823 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 ANKRD20A3Q5VUR7 823 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 LCLAT1Q6UWP7 414 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 SYDE1Q6ZW31 735 aaPredicted RBP20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 KCNV2Q8TDN2 545 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 CLEC4CQ8WTT0 213 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 P3H4Q92791 437 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 TLCD1Q96CP7 247 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 SMIM28A0A1B0GU29 152 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 MEIS3P2A8K0S8 358 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 TNPO2O14787 897 aaKnown RBP20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 TTC4O95801 387 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 KRT7P08729 469 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 KCNJ2P63252 427 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 GAD2Q05329 585 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 SOX4Q06945 474 aaPredicted RBP20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 NPNTQ6UXI9 565 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 BEST2Q8NFU1 509 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 ZFP42Q96MM3 310 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 NINJ2Q9NZG7 142 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 WDR35Q9P2L0 1181 aa20.23■□□□□ 0.83
LAPTM4B-204ENST00000619747 MBLAC1A4D2B0 266 aaPredicted RBP20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 A8MUI8 341 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 PIAS1O75925 651 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 VCPP55072 806 aaKnown RBP20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 SPDYCQ5MJ68 293 aa20.22■□□□□ 0.83
LAPTM4B-204ENST00000619747 C9orf57Q5W0N0 161 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms