RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 RSAD2Q8WXG1 361 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 CPA5Q8WXQ8 436 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 PCDHB18PQ96TA0 734 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 LBHD1Q9BQE6 289 aaPredicted RBP7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 MRPL4Q9BYD3 311 aaKnown RBP7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 SLCO1B3Q9NPD5 702 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 ACP6Q9NPH0 428 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 LGALS13Q9UHV8 139 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 LRCH1Q9Y2L9 728 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 GOLGA8SH3BPF8 625 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 GOLGA8MH3BSY2 632 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 ENTPD5O75356 428 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 MTA2O94776 668 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 VTNP04004 478 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 ACADSP16219 412 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 ARL4CP56559 192 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 TMEM62Q0P6H9 643 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 PDK4Q16654 411 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 KLHL38Q2WGJ6 581 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 OLFML2BQ68BL8 750 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 MTDHQ86UE4 582 aaKnown RBP7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 FAM71AQ8IYT1 594 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 ATP11CQ8NB49 1132 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 KATNBL1Q9H079 304 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 C2orf40Q9H1Z8 148 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 VCX3BQ9H321 246 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 SPC25Q9HBM1 224 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 VCX3AQ9NNX9 186 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 MYH9P35579 1960 aaKnown RBP7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 RBBP6Q7Z6E9 1792 aaKnown RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 DOCK5Q9H7D0 1870 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 CAPN9O14815 690 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 INHBAP08476 426 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 GSTA2P09210 222 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 KRT4P19013 534 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 RRM1P23921 792 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 YY1P25490 414 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 SH3BGRP55822 239 aaPredicted RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 FMO1Q01740 532 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 SP3Q02447 781 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 GRIK4Q16099 956 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 GNASQ5JWF2 1037 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 LMBRD2Q68DH5 695 aaPredicted RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 DPY19L2P1Q6NXN4 242 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 IRGCQ6NXR0 463 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 MFN1Q8IWA4 741 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 THNSL1Q8IYQ7 743 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 TAB3Q8N5C8 712 aaPredicted RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 MAML1Q92585 1016 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 TTC17Q96AE7 1141 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 HAUS1Q96CS2 278 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 BORCS6Q96GS4 357 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 ASB16Q96NS5 453 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 RPL26L1Q9UNX3 145 aaKnown RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 TLR3O15455 904 aaKnown RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 EDF1O60869 148 aaKnown RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 TCEA3O75764 348 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 ADRB2P07550 413 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 ABHD2P08910 425 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 HOXC6P09630 235 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 TPBGLP0DKB5 382 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 GARTP22102 1010 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 PIK3CAP42336 1068 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 OVGP1Q12889 678 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 DYNC1I2Q13409 638 aaKnown RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 PKN2Q16513 984 aaKnown RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 HIF1AQ16665 826 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 BBS9Q3SYG4 887 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 EPC2Q52LR7 807 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 SLC45A4Q5BKX6 768 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 FAM47CQ5HY64 1035 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 SNX30Q5VWJ9 437 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 PPP1R2P3Q6NXS1 205 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 ASRGL1Q7L266 308 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 PASD1Q8IV76 773 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 C12orf56Q8IXR9 622 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 CYP4X1Q8N118 509 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 ZCCHC9Q8N567 271 aaKnown RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 CCDC110Q8TBZ0 833 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 SLCO2A1Q92959 643 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 RILPQ96NA2 401 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 C16orf70Q9BSU1 422 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 TSSK1BQ9BXA7 367 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 TMEM8AQ9HCN3 771 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 SAR1AQ9NR31 198 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 GJD2Q9UKL4 321 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 GABRQQ9UN88 632 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 PCDHB4Q9Y5E5 795 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 ADGRA2Q96PE1 1338 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 A0A087WZ62 844 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 IQANK1A0A1B0GTG1 560 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 DPPA5A6NC42 116 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 C3orf80F5H4A9 247 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 PI4K2BG5E9Z4 385 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 PSTPIP1O43586 416 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 FOXN2P32314 431 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 PGM1P36871 562 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 PHKA2P46019 1235 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 CPT1AP50416 773 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 NLRP11P59045 1033 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms