RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 SLC20A1Q8WUM9 679 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 GMCL1Q96IK5 515 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 STARD13Q9Y3M8 1113 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ACTL7BQ9Y614 415 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 H0YGN5 161 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 MAMLD1Q13495 774 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ANO4Q32M45 955 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 TTC33Q6PID6 262 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 SAMD7Q7Z3H4 446 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SLC22A9Q8IVM8 553 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ARHGEF26Q96DR7 871 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 GCNAQ96QF7 691 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PURBQ96QR8 312 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 NFS1Q9Y697 457 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SAC3D1A6NKF1 404 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ZBTB39O15060 712 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 RBP1P09455 135 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PTK7Q13308 1070 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 FAM83EQ2M2I3 478 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 WDR60Q8WVS4 1066 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 POP5Q969H6 163 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 PNMA5Q96PV4 448 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 RABL2BQ9UNT1 228 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 RPL26L1Q9UNX3 145 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 OVOS2A0A0G2JMS6 1433 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 NCAM2O15394 837 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 RECKO95980 971 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 VIL1P09327 827 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 SLC1A6P48664 564 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SPDYAQ5MJ70 313 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SLC4A9Q96Q91 983 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CNPY3Q9BT09 278 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ZNRF3Q9ULT6 936 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SOX13Q9UN79 622 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ANKRD6Q9Y2G4 727 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 KDM5AP29375 1690 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 A0A1B0GW55 424 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 FANCGO15287 622 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 NTSR2O95665 410 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 F9P00740 461 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 NR3C2P08235 984 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DUX4L2P0CJ85 424 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DUX4L3P0CJ86 424 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DUX4L4P0CJ87 422 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DUX4L5P0CJ88 424 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DUX4L6P0CJ89 424 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DUX4L7P0CJ90 424 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 IMPDH2P12268 514 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 S100A5P33763 92 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 MYL6P60660 151 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DNAJC3Q13217 504 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SHQ1Q6PI26 577 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 LRRC55Q6ZSA7 311 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SPATA17Q96L03 361 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SPON2Q9BUD6 331 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CCDC28BQ9BUN5 200 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 KLHL11Q9NVR0 708 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DUX4Q9UBX2 424 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 MAGED2Q9UNF1 606 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 AGAP1Q9UPQ3 857 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 COL3A1P02461 1466 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 ATP9BO43861 1147 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CBX6O95503 412 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PDAP1Q13442 181 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 AUHQ13825 339 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 LBRQ14739 615 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 DCAF4L1Q3SXM0 396 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DUPD1Q68J44 220 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CCDC60Q8IWA6 550 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 PRMT6Q96LA8 375 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 DACH2Q96NX9 599 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 NR1H4Q96RI1 486 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 PPP1R16BQ96T49 567 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SYBUQ9NX95 663 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 H2AFY2Q9P0M6 372 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 TUBGCP4Q9UGJ1 667 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DSEQ9UL01 958 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 SLC39A10Q9ULF5 831 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CYP3A7-CYP3A51PA0A087WV96 503 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ALBP02768 609 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PAEPP09466 180 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CYP3A7P24462 503 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ATICP31939 592 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PTDSS1P48651 473 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 CHN2P52757 468 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 VCPP55072 806 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 DEFA1P59665 94 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DEFA3P59666 94 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CHRNB3Q05901 458 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 DPYSL3Q14195 570 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 MTFR1Q15390 333 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 MAPRE1Q15691 268 aaKnown RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 FAM102AQ5T9C2 384 aaPredicted RBP3.16□□□□□ -1.9
LPP-221ENST00000618621 MFSD5Q6N075 450 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ALG3Q92685 438 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 VANGL2Q9ULK5 521 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PCDHA3Q9Y5H8 950 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 ARAP3Q8WWN8 1544 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 CROCCQ5TZA2 2017 aa3.16□□□□□ -1.9
LPP-221ENST00000618621 PRKCBP05771 671 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms