RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 HECTD3Q5T447 861 aa16.34■□□□□ 0.21
SRGAP2C-205ENST00000617209 CC2D1AQ6P1N0 951 aaPredicted RBP16.34■□□□□ 0.21
SRGAP2C-205ENST00000617209 PPM1KQ8N3J5 372 aa16.34■□□□□ 0.21
SRGAP2C-205ENST00000617209 ZNF276Q8N554 614 aa16.34■□□□□ 0.21
SRGAP2C-205ENST00000617209 SH3RF2Q8TEC5 729 aa16.34■□□□□ 0.21
SRGAP2C-205ENST00000617209 FAM3CQ92520 227 aa16.34■□□□□ 0.21
SRGAP2C-205ENST00000617209 FAM81BQ96LP2 452 aa16.34■□□□□ 0.21
SRGAP2C-205ENST00000617209 TLR8Q9NR97 1041 aaKnown RBP16.34■□□□□ 0.21
SRGAP2C-205ENST00000617209 GTSE1Q9NYZ3 720 aa16.34■□□□□ 0.21
SRGAP2C-205ENST00000617209 CNTN6Q9UQ52 1028 aa16.34■□□□□ 0.21
SRGAP2C-205ENST00000617209 USP3Q9Y6I4 520 aa16.34■□□□□ 0.21
SRGAP2C-205ENST00000617209 COL4A3Q01955 1670 aa16.34■□□□□ 0.21
SRGAP2C-205ENST00000617209 ABL1P00519 1130 aa16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 DCNP07585 359 aaKnown RBP16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 TARSP26639 723 aaKnown RBP16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 PSEN1P49768 467 aa16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 KPNA1P52294 538 aaPredicted RBP16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 SLC8A3P57103 927 aa16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 ZXDBP98169 803 aa16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 IFRD2Q12894 506 aaPredicted RBP16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 RUNX3Q13761 415 aa16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 UBXN2BQ14CS0 331 aa16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 RAB41Q5JT25 222 aa16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 TMEM270Q6UE05 265 aa16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 MAMSTRQ6ZN01 415 aa16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 ENOSF1Q7L5Y1 443 aa16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 ENOX1Q8TC92 643 aaKnown RBP16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 OSCP1Q8WVF1 389 aa16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 INTS2Q9H0H0 1204 aaKnown RBP16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 HPS4Q9NQG7 708 aa16.33■□□□□ 0.2
SRGAP2C-205ENST00000617209 SPECC1L-ADORA2AF8WAN1 911 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 RNF225M0QZC1 329 aaPredicted RBP16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 CTHP32929 405 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 PLA2G5P39877 138 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 MTIF2P46199 727 aaKnown RBP16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 AMPD2Q01433 879 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 NHLH1Q02575 133 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 TNK2Q07912 1038 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 STILQ15468 1287 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 CNGA2Q16280 664 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 MAN2A1Q16706 1144 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 GBP6Q6ZN66 633 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 RRAGAQ7L523 313 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 GPRIN1Q7Z2K8 1008 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 CCDC186Q7Z3E2 898 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 DDX42Q86XP3 938 aaKnown RBP eCLIP16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 CREBRFQ8IUR6 639 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 ARHGEF19Q8IW93 802 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 KAT5Q92993 513 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 FAM122AQ96E09 287 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 KREMEN1Q96MU8 473 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 CYLDQ9NQC7 956 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 GMIPQ9P107 970 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 TSPAN16Q9UKR8 245 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 PCDHB4Q9Y5E5 795 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 MYO16Q9Y6X6 1858 aa16.32■□□□□ 0.2
SRGAP2C-205ENST00000617209 LEFTY2O00292 366 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 O00370 1275 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 COCHO43405 550 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 ZNF132P52740 706 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 BCAT1P54687 386 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 EML3Q32P44 896 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 PKDCCQ504Y2 493 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 KLHDC10Q6PID8 442 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 TRIM65Q6PJ69 517 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 LCLAT1Q6UWP7 414 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 PIGZQ86VD9 579 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 TTC30AQ86WT1 665 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 ATP2A3Q93084 1043 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 TUBGCP2Q9BSJ2 902 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 IER2Q9BTL4 223 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 NDST4Q9H3R1 872 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 EBF3Q9H4W6 596 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 DUS2Q9NX74 493 aaKnown RBP16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 CLIC5Q9NZA1 410 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 HESX1Q9UBX0 185 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 CPQQ9Y646 472 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 PIEZO1Q92508 2521 aa16.31■□□□□ 0.2
SRGAP2C-205ENST00000617209 E2F8A0AVK6 867 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 OTOL1A6NHN0 477 aaPredicted RBP16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 SLC9A3R1O14745 358 aaPredicted RBP16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 XPO1O14980 1071 aaKnown RBP16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 TLR5O60602 858 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 SETSIPP0DME0 302 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 MBL2P11226 248 aaPredicted RBP16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 CHRNB1P11230 501 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 CD19P15391 556 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 SLC9A1P19634 815 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 EEF1GP26641 437 aaKnown RBP16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 SOX9P48436 509 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 PGFP49763 221 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 MFAP3P55082 362 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 PDE4CQ08493 712 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 BST2Q10589 180 aaKnown RBP16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 EXOC3L4Q17RC7 722 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 VWA3BQ502W6 1294 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 CCDC183Q5T5S1 534 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 TRIM68Q6AZZ1 485 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 PM20D1Q6GTS8 502 aa16.3■□□□□ 0.2
SRGAP2C-205ENST00000617209 TXNDC11Q6PKC3 985 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms