RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 SYAP1Q96A49 352 aaPredicted RBP20.14■□□□□ 0.81
CDX1-202ENST00000616154 SLITRK1Q96PX8 696 aa20.14■□□□□ 0.81
CDX1-202ENST00000616154 VRTNQ9H8Y1 702 aa20.14■□□□□ 0.81
CDX1-202ENST00000616154 VPS45Q9NRW7 570 aa20.14■□□□□ 0.81
CDX1-202ENST00000616154 LMBRD1Q9NUN5 540 aa20.14■□□□□ 0.81
CDX1-202ENST00000616154 CPQQ9Y646 472 aa20.14■□□□□ 0.81
CDX1-202ENST00000616154 ABCA7Q8IZY2 2146 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 A8MXQ7 604 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 K7EQS6 105 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 SLC9A3R1O14745 358 aaPredicted RBP20.13■□□□□ 0.81
CDX1-202ENST00000616154 MAPK13O15264 365 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 RHOBTB1O94844 696 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 NR3C1P04150 777 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 CYP17A1P05093 508 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 MCCD1P59942 119 aaPredicted RBP20.13■□□□□ 0.81
CDX1-202ENST00000616154 ENPEPQ07075 957 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 ELF2Q15723 593 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 TSTD1Q8NFU3 115 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 CCDC34Q96HJ3 373 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 B3GNT5Q9BYG0 378 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 RXFP3Q9NSD7 469 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 NXF1Q9UBU9 619 aaKnown RBP20.13■□□□□ 0.81
CDX1-202ENST00000616154 THADAQ6YHU6 1953 aa20.13■□□□□ 0.81
CDX1-202ENST00000616154 TM4SF5O14894 197 aa20.12■□□□□ 0.81
CDX1-202ENST00000616154 ABL1P00519 1130 aa20.12■□□□□ 0.81
CDX1-202ENST00000616154 ZCWPW2Q504Y3 356 aa20.12■□□□□ 0.81
CDX1-202ENST00000616154 DDX42Q86XP3 938 aaKnown RBP eCLIP20.12■□□□□ 0.81
CDX1-202ENST00000616154 ADGRG2Q8IZP9 1017 aa20.12■□□□□ 0.81
CDX1-202ENST00000616154 NUP93Q8N1F7 819 aa20.12■□□□□ 0.81
CDX1-202ENST00000616154 SPATA20Q8TB22 786 aa20.12■□□□□ 0.81
CDX1-202ENST00000616154 TMC2Q8TDI7 906 aa20.12■□□□□ 0.81
CDX1-202ENST00000616154 SMPD4Q9NXE4 827 aa20.12■□□□□ 0.81
CDX1-202ENST00000616154 MYH10P35580 1976 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 LAMA1P25391 3075 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 ATP8B3O60423 1300 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 LRRIQ3A6PVS8 624 aaPredicted RBP20.11■□□□□ 0.81
CDX1-202ENST00000616154 GOLGA6L22H0YM25 854 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 CLDN5O00501 218 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 DCLK1O15075 740 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 PHACTR2O75167 634 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 RTN3O95197 1032 aaPredicted RBP20.11■□□□□ 0.81
CDX1-202ENST00000616154 YWHAQP27348 245 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 CASP4P49662 377 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 DGKEP52429 567 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 SEC13P55735 322 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 DHCR24Q15392 516 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 COBLL1Q53SF7 1204 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 C2orf27AQ580R0 203 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 STPG1Q5TH74 334 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 C11orf74Q86VG3 221 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 RASSF3Q86WH2 238 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 PDZD8Q8NEN9 1154 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 OVCA2Q8WZ82 227 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 TIGD1Q96MW7 591 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 SMOC1Q9H4F8 434 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 SMYD3Q9H7B4 428 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 CFAP97Q9P2B7 532 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 MMP17Q9ULZ9 603 aa20.11■□□□□ 0.81
CDX1-202ENST00000616154 CALUO43852 315 aaPredicted RBP20.1■□□□□ 0.81
CDX1-202ENST00000616154 C4BPAP04003 597 aaKnown RBP20.1■□□□□ 0.81
CDX1-202ENST00000616154 MBL2P11226 248 aaPredicted RBP20.1■□□□□ 0.81
CDX1-202ENST00000616154 EIF2DP41214 584 aaKnown RBP20.1■□□□□ 0.81
CDX1-202ENST00000616154 UBE2HP62256 183 aa20.1■□□□□ 0.81
CDX1-202ENST00000616154 MRPS21P82921 87 aaKnown RBP20.1■□□□□ 0.81
CDX1-202ENST00000616154 IFRD2Q12894 506 aaPredicted RBP20.1■□□□□ 0.81
CDX1-202ENST00000616154 ZNF699Q32M78 642 aa20.1■□□□□ 0.81
CDX1-202ENST00000616154 ELOA2Q8IYF1 753 aaPredicted RBP20.1■□□□□ 0.81
CDX1-202ENST00000616154 FBXO32Q969P5 355 aa20.1■□□□□ 0.81
CDX1-202ENST00000616154 CNOT6LQ96LI5 555 aaKnown RBP20.1■□□□□ 0.81
CDX1-202ENST00000616154 MYO18AQ92614 2054 aaKnown RBP20.1■□□□□ 0.81
CDX1-202ENST00000616154 IKBKBO14920 756 aa20.09■□□□□ 0.81
CDX1-202ENST00000616154 GADD45BO75293 160 aaPredicted RBP20.09■□□□□ 0.81
CDX1-202ENST00000616154 ADH1CP00326 375 aa20.09■□□□□ 0.81
CDX1-202ENST00000616154 BIRC3Q13489 604 aa20.09■□□□□ 0.81
CDX1-202ENST00000616154 ZACNQ401N2 412 aa20.09■□□□□ 0.81
CDX1-202ENST00000616154 USP39Q53GS9 565 aaKnown RBP20.09■□□□□ 0.81
CDX1-202ENST00000616154 ZNF667Q5HYK9 610 aa20.09■□□□□ 0.81
CDX1-202ENST00000616154 RHBDF2Q6PJF5 856 aa20.09■□□□□ 0.81
CDX1-202ENST00000616154 FAM35AQ86V20 835 aa20.09■□□□□ 0.81
CDX1-202ENST00000616154 GSDMAQ96QA5 445 aa20.09■□□□□ 0.81
CDX1-202ENST00000616154 KCNK16Q96T55 309 aa20.09■□□□□ 0.81
CDX1-202ENST00000616154 PNKPQ96T60 521 aa20.09■□□□□ 0.81
CDX1-202ENST00000616154 TBC1D14Q9P2M4 693 aa20.09■□□□□ 0.81
CDX1-202ENST00000616154 PLXND1Q9Y4D7 1925 aa20.09■□□□□ 0.81
CDX1-202ENST00000616154 E2F8A0AVK6 867 aa20.08■□□□□ 0.81
CDX1-202ENST00000616154 BCLAF3A2AJT9 711 aaKnown RBP20.08■□□□□ 0.81
CDX1-202ENST00000616154 GOLGA6L4A6NEF3 574 aa20.08■□□□□ 0.81
CDX1-202ENST00000616154 ANTXRLA6NF34 631 aa20.08■□□□□ 0.81
CDX1-202ENST00000616154 TNFRSF10BO14763 440 aa20.08■□□□□ 0.81
CDX1-202ENST00000616154 SCAMP3O14828 347 aaKnown RBP20.08■□□□□ 0.81
CDX1-202ENST00000616154 CHRM1P11229 460 aaPredicted RBP20.08■□□□□ 0.81
CDX1-202ENST00000616154 KCNA4P22459 653 aa20.08■□□□□ 0.81
CDX1-202ENST00000616154 SLC6A11P48066 632 aa20.08■□□□□ 0.81
CDX1-202ENST00000616154 CDH8P55286 799 aa20.08■□□□□ 0.81
CDX1-202ENST00000616154 CREB5Q02930 508 aa20.08■□□□□ 0.81
CDX1-202ENST00000616154 NCOA4Q13772 614 aa20.08■□□□□ 0.81
CDX1-202ENST00000616154 CRY1Q16526 586 aa20.08■□□□□ 0.81
CDX1-202ENST00000616154 EDRF1Q3B7T1 1238 aa20.08■□□□□ 0.81
CDX1-202ENST00000616154 C1orf220Q5T0J3 134 aa20.08■□□□□ 0.81
CDX1-202ENST00000616154 SNX30Q5VWJ9 437 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms