RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SH3BP1Q9Y3L3 701 aa18.97■□□□□ 0.63
SMN2-213ENST00000614240 ANAPC1Q9H1A4 1944 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 E2F8A0AVK6 867 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 LNP1A1A4G5 178 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 K7ELQ4 463 aaPredicted RBP18.96■□□□□ 0.63
SMN2-213ENST00000614240 POLR2DO15514 142 aaKnown RBP18.96■□□□□ 0.63
SMN2-213ENST00000614240 YEATS4O95619 227 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 STAU1O95793 577 aaKnown RBP18.96■□□□□ 0.63
SMN2-213ENST00000614240 CASP1P29466 404 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 EIF2DP41214 584 aaKnown RBP18.96■□□□□ 0.63
SMN2-213ENST00000614240 GRIA2P42262 883 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 SHC2P98077 582 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 GAD2Q05329 585 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 ZNF699Q32M78 642 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 HSF5Q4G112 596 aaPredicted RBP18.96■□□□□ 0.63
SMN2-213ENST00000614240 ZNF667Q5HYK9 610 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 LY6G5CQ5SRR4 150 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 HECTD3Q5T447 861 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 EMC10Q5UCC4 262 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 TMEM92Q6UXU6 159 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 LPCAT2Q7L5N7 544 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 SFTPA1Q8IWL2 248 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 IL17RCQ8NAC3 791 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 WHAMMQ8TF30 809 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 RLN3Q8WXF3 142 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 OVCA2Q8WZ82 227 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 KCNK16Q96T55 309 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 SMYD3Q9H7B4 428 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 TMEM9BQ9NQ34 198 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 TMEM30AQ9NV96 361 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 FAM13BQ9NYF5 915 aa18.96■□□□□ 0.63
SMN2-213ENST00000614240 EML5Q05BV3 1969 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 TBC1D3BA6NDS4 549 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 SGK1O00141 431 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 COCHO43405 550 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 AFMP43652 599 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 CDH8P55286 799 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 KNOP1Q1ED39 458 aaKnown RBP18.95■□□□□ 0.62
SMN2-213ENST00000614240 FOXD4L6Q3SYB3 417 aaPredicted RBP18.95■□□□□ 0.62
SMN2-213ENST00000614240 FOXD4L3Q6VB84 417 aaPredicted RBP18.95■□□□□ 0.62
SMN2-213ENST00000614240 SCARA5Q6ZMJ2 495 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 FAM35AQ86V20 835 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 C12orf40Q86WS4 652 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 SCAMP5Q8TAC9 235 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 HMGB4Q8WW32 186 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 OTUB2Q96DC9 234 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 TNIP3Q96KP6 325 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 XYLT2Q9H1B5 865 aa18.95■□□□□ 0.62
SMN2-213ENST00000614240 DMAP1Q9NPF5 467 aaPredicted RBP18.95■□□□□ 0.62
SMN2-213ENST00000614240 PVALEFA0A1B0GWK0 134 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 PATE3B3GLJ2 98 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 HNRNPLP14866 589 aaKnown RBP eCLIP18.94■□□□□ 0.62
SMN2-213ENST00000614240 TNFRSF4P43489 277 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 CASP4P49662 377 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 AP3M2P53677 418 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 MESP2Q0VG99 397 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 BYSLQ13895 437 aaKnown RBP18.94■□□□□ 0.62
SMN2-213ENST00000614240 UAP1L1Q3KQV9 507 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 PREPLQ4J6C6 727 aaPredicted RBP18.94■□□□□ 0.62
SMN2-213ENST00000614240 SH3PXD2AQ5TCZ1 1133 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 NUDT18Q6ZVK8 323 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 ARMCX6Q7L4S7 300 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 C12orf56Q8IXR9 622 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 NAT16Q8N8M0 369 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 GOLGA5Q8TBA6 731 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 SMARCD1Q96GM5 515 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 CHD8Q9HCK8 2581 aa18.94■□□□□ 0.62
SMN2-213ENST00000614240 MAP1BP46821 2468 aaKnown RBP18.93■□□□□ 0.62
SMN2-213ENST00000614240 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 TCRBV21S2A2A0A5A6 115 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 GIPC1O14908 333 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 AP1G2O75843 785 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 IRF1P10914 325 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 P2RY2P41231 377 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 ME1P48163 572 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 SLC5A3P53794 718 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 IRX4P78413 519 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 EHHADHQ08426 723 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 NCOA4Q13772 614 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 BMT2Q1RMZ1 405 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 ANO4Q32M45 955 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 TMEFF1Q8IYR6 380 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 OLIG1Q8TAK6 271 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 GZF1Q9H116 711 aaPredicted RBP18.93■□□□□ 0.62
SMN2-213ENST00000614240 CCSER2Q9H7U1 834 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 ZDHHC4Q9NPG8 344 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 GMIPQ9P107 970 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 DEC1Q9P2X7 70 aa18.93■□□□□ 0.62
SMN2-213ENST00000614240 HELZP42694 1942 aaKnown RBP18.93■□□□□ 0.62
SMN2-213ENST00000614240 KMT2BQ9UMN6 2715 aaPredicted RBP18.92■□□□□ 0.62
SMN2-213ENST00000614240 A0A0A0MRY4 1105 aa18.92■□□□□ 0.62
SMN2-213ENST00000614240 ZBTB24O43167 697 aaPredicted RBP18.92■□□□□ 0.62
SMN2-213ENST00000614240 P4HA1P13674 534 aa18.92■□□□□ 0.62
SMN2-213ENST00000614240 KIR2DL1P43626 348 aaPredicted RBP18.92■□□□□ 0.62
SMN2-213ENST00000614240 ZNF252P-AS1Q0IIN9 211 aa18.92■□□□□ 0.62
SMN2-213ENST00000614240 LMAN2Q12907 356 aa18.92■□□□□ 0.62
SMN2-213ENST00000614240 FOXC1Q12948 553 aa18.92■□□□□ 0.62
SMN2-213ENST00000614240 CUL4BQ13620 913 aa18.92■□□□□ 0.62
SMN2-213ENST00000614240 TRIM61Q5EBN2 209 aa18.92■□□□□ 0.62
SMN2-213ENST00000614240 TRMT11Q7Z4G4 463 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms