RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 FAM149B1Q96BN6 582 aa18.42■□□□□ 0.54
SREK1-216ENST00000612404 CNGB3Q9NQW8 809 aa18.42■□□□□ 0.54
SREK1-216ENST00000612404 TLR9Q9NR96 1032 aa18.42■□□□□ 0.54
SREK1-216ENST00000612404 FNIP2Q9P278 1114 aa18.42■□□□□ 0.54
SREK1-216ENST00000612404 MSRAQ9UJ68 235 aa18.42■□□□□ 0.54
SREK1-216ENST00000612404 AMFRQ9UKV5 643 aa18.42■□□□□ 0.54
SREK1-216ENST00000612404 TRANK1O15050 2925 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 SPOPO43791 374 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 PROSCO94903 275 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 ABLIM3O94929 683 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 ZBED1O96006 694 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 RB1P06400 928 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 CNPP09543 421 aaKnown RBP18.41■□□□□ 0.54
SREK1-216ENST00000612404 COMTP21964 271 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 OGDHQ02218 1023 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 RAB33AQ14088 237 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 EFHC1Q5JVL4 640 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 MEI1Q5TIA1 1274 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 SLC26A9Q7LBE3 791 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 NT5DC3Q86UY8 548 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 MICAL1Q8TDZ2 1067 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 CERS4Q9HA82 394 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 TMEM59LQ9UK28 342 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 USTQ9Y2C2 406 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 ATF2P15336 505 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 PSMA2P25787 234 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 UBE3AQ05086 875 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 CPNE8Q86YQ8 564 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 SAMD11Q96NU1 681 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 NKX2-4Q9H2Z4 354 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 CYP4F11Q9HBI6 524 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 RXFP1Q9HBX9 757 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 CDH23Q9H251 3354 aa18.41■□□□□ 0.54
SREK1-216ENST00000612404 TNFRSF10BO14763 440 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 GRM6O15303 877 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 PDGFRAP16234 1089 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 FLT3P36888 993 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 SCNN1AP37088 669 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 TUFMP49411 452 aaKnown RBP18.4■□□□□ 0.54
SREK1-216ENST00000612404 DAOAP59103 153 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 ERVK-21P61565 698 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 RPL10AP62906 217 aaKnown RBP18.4■□□□□ 0.54
SREK1-216ENST00000612404 ZNF252P-AS1Q0IIN9 211 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 DAB2IPQ5VWQ8 1189 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 NUP93Q8N1F7 819 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.4■□□□□ 0.54
SREK1-216ENST00000612404 RXFP2Q8WXD0 754 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 KHSRPQ92945 711 aaKnown RBP eCLIP18.4■□□□□ 0.541e-7■■■□□ 16.5
SREK1-216ENST00000612404 PSMB7Q99436 277 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 PATJQ8NI35 1801 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 PRRG1O14668 218 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 SART1O43290 800 aaKnown RBP18.4■□□□□ 0.54
SREK1-216ENST00000612404 HSF2BPO75031 334 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 URI1O94763 535 aaPredicted RBP18.4■□□□□ 0.54
SREK1-216ENST00000612404 SEC24AO95486 1093 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 GPD1P21695 349 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 ELF1P32519 619 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 SSR1P43307 286 aaKnown RBP18.4■□□□□ 0.54
SREK1-216ENST00000612404 PIGHQ14442 188 aaPredicted RBP18.4■□□□□ 0.54
SREK1-216ENST00000612404 SMC1AQ14683 1233 aaKnown RBP18.4■□□□□ 0.54
SREK1-216ENST00000612404 RPS6KA1Q15418 735 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 RAB30Q15771 203 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 PPP2R2DQ66LE6 453 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 TLR10Q9BXR5 811 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 EMILIN2Q9BXX0 1053 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 LCMT1Q9UIC8 334 aa18.4■□□□□ 0.54
SREK1-216ENST00000612404 C2CD4BA6NLJ0 364 aa18.39■□□□□ 0.53
SREK1-216ENST00000612404 YJEFN3A6XGL0 299 aa18.39■□□□□ 0.53
SREK1-216ENST00000612404 HIDE1A8MVS5 230 aa18.39■□□□□ 0.53
SREK1-216ENST00000612404 E7ENQ6 273 aa18.39■□□□□ 0.53
SREK1-216ENST00000612404 LPXNO60711 386 aa18.39■□□□□ 0.53
SREK1-216ENST00000612404 YWHAZP63104 245 aaKnown RBP18.39■□□□□ 0.53
SREK1-216ENST00000612404 GPM6BQ13491 265 aa18.39■□□□□ 0.53
SREK1-216ENST00000612404 TRNP1Q6NT89 227 aa18.39■□□□□ 0.53
SREK1-216ENST00000612404 TDHQ8IZJ6 230 aa18.39■□□□□ 0.53
SREK1-216ENST00000612404 FNIP1Q8TF40 1166 aa18.39■□□□□ 0.53
SREK1-216ENST00000612404 GIPC2Q8TF65 315 aa18.39■□□□□ 0.53
SREK1-216ENST00000612404 CFAP57Q96MR6 1250 aa18.39■□□□□ 0.53
SREK1-216ENST00000612404 USP3Q9Y6I4 520 aa18.39■□□□□ 0.53
SREK1-216ENST00000612404 ADH1AP07327 375 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 SPATA31D3P0C874 917 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 KLRC2P26717 231 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 SDC4P31431 198 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 BMP8BP34820 402 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 SLC1A1P43005 524 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 ZNF143P52747 638 aaPredicted RBP18.38■□□□□ 0.53
SREK1-216ENST00000612404 PM20D1Q6GTS8 502 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 SPATA31D4Q6ZUB0 917 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 DENND5BQ6ZUT9 1274 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 MRPL43Q8N983 215 aaKnown RBP18.38■□□□□ 0.53
SREK1-216ENST00000612404 GOLGA1Q92805 767 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 SPATA17Q96L03 361 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 KLHL5Q96PQ7 755 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 IRAK3Q9Y616 596 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 MYO7AQ13402 2215 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 C2orf71A6NGG8 1288 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 ATF6P18850 670 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 HFE2Q6ZVN8 426 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 IRGQQ8WZA9 623 aa18.38■□□□□ 0.53
SREK1-216ENST00000612404 FBXO44Q9H4M3 255 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms