RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 INF2Q27J81 1249 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SLC10A6Q3KNW5 377 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SLC39A12Q504Y0 691 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 HES3Q5TGS1 186 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 BROXQ5VW32 411 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PPP4R3AQ6IN85 833 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ARMCX5Q6P1M9 558 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 FBXL19Q6PCT2 694 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 RHBDF2Q6PJF5 856 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ATG14Q6ZNE5 492 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 MIB1Q86YT6 1006 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 EXD3Q8N9H8 876 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ZNF248Q8NDW4 579 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 STKLD1Q8NE28 680 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TTC16Q8NEE8 873 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SH3RF2Q8TEC5 729 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PIGOQ8TEQ8 1089 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NAF1Q96HR8 494 aaKnown RBP7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 HIC2Q96JB3 615 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 C8orf76Q96K31 380 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NACC1Q96RE7 527 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 LGMNQ99538 433 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NAP1L4Q99733 375 aaKnown RBP7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 EIF2AK1Q9BQI3 630 aaKnown RBP7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 FAM117AQ9C073 453 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ARHGEF4Q9NR80 690 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SMC3Q9UQE7 1217 aa7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 HEMK1Q9Y5R4 338 aaPredicted RBP7.74□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TRAV19A0A0A6YYK7 116 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 METTL12A8MUP2 240 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 C1SP09871 688 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CDK4P11802 303 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 MYF5P13349 255 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 HOXB2P14652 356 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 KRT2P35908 639 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 WASP42768 502 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NAMPTP43490 491 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 GPR15P49685 360 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NFKB2Q00653 900 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ZBTB6Q15916 424 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 KIF19Q2TAC6 998 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 KIAA1614Q5VZ46 1190 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 DSTYKQ6XUX3 929 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 APBB1IPQ7Z5R6 666 aaPredicted RBP7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CACTIN-AS1Q8N1I8 211 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ARL14EPQ8N8R7 260 aaPredicted RBP7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 MCPH1Q8NEM0 835 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ENGASEQ8NFI3 743 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 FBXO18Q8NFZ0 1043 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CADM4Q8NFZ8 388 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 IPO4Q8TEX9 1081 aaKnown RBP7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 MRGPRX1Q96LB2 322 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 AIFM3Q96NN9 605 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ACO2Q99798 780 aaKnown RBP7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 KIFC3Q9BVG8 833 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TMUB1Q9BVT8 246 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 MIR1-1HGQ9H1L0 117 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SLC6A17Q9H1V8 727 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 FOXP1Q9H334 677 aaPredicted RBP7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 WSB2Q9NYS7 404 aaPredicted RBP7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 FTSJ1Q9UET6 329 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ARHGAP26Q9UNA1 814 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PAXBP1Q9Y5B6 917 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SNX11Q9Y5W9 270 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SLCO1B1Q9Y6L6 691 aa7.73□□□□□ -1.17
PTCHD3P1-201ENST00000612350 USP9YO00507 2555 aaPredicted RBP7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 LRRK2Q5S007 2527 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 C2orf78A6NCI8 922 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 MEI4A8MW99 385 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 BTBD18B2RXH4 712 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CBX4O00257 560 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 KCNK3O14649 394 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PAPSS1O43252 624 aaPredicted RBP7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 RFPL3O75679 317 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NOL4O94818 638 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CKMP06732 381 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CSH1P0DML2 217 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CSH2P0DML3 217 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NCAM1P13591 858 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 GCFC2P16383 781 aaKnown RBP7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ATP2B1P20020 1258 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 POU3F2P20265 443 aaPredicted RBP7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PROZP22891 400 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 GJB2P29033 226 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CD6P30203 668 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NTSR1P30989 418 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TNFSF9P41273 254 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CSNK1EP49674 416 aaKnown RBP7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 EFNA5P52803 228 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 COPS2P61201 443 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 KDSRQ06136 332 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 BECN1Q14457 450 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 DCAF12L1Q5VU92 463 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SDHAF4Q5VUM1 108 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TRMT11Q7Z4G4 463 aaKnown RBP7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 FILIP1Q7Z7B0 1213 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 METTL3Q86U44 580 aaKnown RBP7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 KIAA1958Q8N8K9 716 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 DEPTORQ8TB45 409 aa7.72□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SPPL2BQ8TCT7 592 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms