RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 FGF19O95750 216 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 TUBBP07437 444 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 CSH1P0DML2 217 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 CSH2P0DML3 217 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 UCHL3P15374 230 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 ATF6P18850 670 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 SLC9A1P19634 815 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 BDNFP23560 247 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 FSHRP23945 695 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 ANXA13P27216 316 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 GRIK1P39086 918 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 PRKCIP41743 596 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 PSEN1P49768 467 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 APBA1Q02410 837 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 GFPT1Q06210 699 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-217ENST00000611848 TAF12Q16514 161 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 ASIC2Q16515 512 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 SLC18A3Q16572 532 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 CCDC142Q17RM4 750 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 CC2D1AQ6P1N0 951 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-217ENST00000611848 PDZD4Q76G19 769 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-217ENST00000611848 ENOSF1Q7L5Y1 443 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 IRF2BP2Q7Z5L9 587 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 DNAJB7Q7Z6W7 309 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-217ENST00000611848 GJD3Q8N144 294 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 UBR7Q8N806 425 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 TDRD5Q8NAT2 981 aaKnown RBP9.33□□□□□ -0.92
SMAD4-217ENST00000611848 HNRNPLLQ8WVV9 542 aaKnown RBP9.33□□□□□ -0.92
SMAD4-217ENST00000611848 TMEM176AQ96HP8 235 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 SPATA17Q96L03 361 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 C8orf48Q96LL4 319 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 TWNKQ96RR1 684 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 MED10Q9BTT4 135 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 B3GNT5Q9BYG0 378 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 HCFC1R1Q9NWW0 138 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 HMGXB4Q9UGU5 601 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 MRPS23Q9Y3D9 190 aaKnown RBP9.33□□□□□ -0.92
SMAD4-217ENST00000611848 BZW2Q9Y6E2 419 aaKnown RBP9.33□□□□□ -0.92
SMAD4-217ENST00000611848 ZFP37Q9Y6Q3 630 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-217ENST00000611848 DENND4CQ5VZ89 1909 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 VCANP13611 3396 aa9.33□□□□□ -0.92
SMAD4-217ENST00000611848 BTNL10A8MVZ5 291 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 PNMA6AP0CW24 399 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-217ENST00000611848 SSTR3P32745 418 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-217ENST00000611848 CDR1P51861 262 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 RAD23BP54727 409 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 JAM2P57087 298 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 NTHL1P78549 312 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 CKAP4Q07065 602 aaKnown RBP9.32□□□□□ -0.92
SMAD4-217ENST00000611848 KLHL30Q0D2K2 578 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 RAPGEF1Q13905 1077 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 DDR2Q16832 855 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 GLIPR1L2Q4G1C9 344 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 ZNF394Q53GI3 561 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 TDRD12Q587J7 1177 aaKnown RBP9.32□□□□□ -0.92
SMAD4-217ENST00000611848 C10orf76Q5T2E6 689 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 PHLDB3Q6NSJ2 640 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 ZNF572Q7Z3I7 529 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-217ENST00000611848 FAM35AQ86V20 835 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 SCN4BQ8IWT1 228 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 ZDHHC14Q8IZN3 488 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 FUKQ8N0W3 1084 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 KRT222Q8N1A0 295 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 C12orf29Q8N999 325 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 SLC4A11Q8NBS3 891 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 GIPC2Q8TF65 315 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 CYFIP2Q96F07 1278 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 SMARCD1Q96GM5 515 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 HNRNPABQ99729 332 aaKnown RBP9.32□□□□□ -0.92
SMAD4-217ENST00000611848 LPIN3Q9BQK8 851 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 LRRC3Q9BY71 257 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 ZNF518BQ9C0D4 1074 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 UBE2TQ9NPD8 197 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-217ENST00000611848 LUC7LQ9NQ29 371 aaKnown RBP9.32□□□□□ -0.92
SMAD4-217ENST00000611848 EHD2Q9NZN4 543 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 UXTQ9UBK9 157 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-217ENST00000611848 APEX2Q9UBZ4 518 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 SNX12Q9UMY4 172 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 DAAM1Q9Y4D1 1078 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 CAPN6Q9Y6Q1 641 aa9.32□□□□□ -0.92
SMAD4-217ENST00000611848 BDP1A6H8Y1 2624 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 C2CD4DB7Z1M9 353 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 F8VP50 259 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 CLDN5O00501 218 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 MOCS3O95396 460 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 PAEPP09466 180 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 ACO1P21399 889 aaKnown RBP9.31□□□□□ -0.92
SMAD4-217ENST00000611848 CDC25CP30307 473 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 GBP2P32456 591 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-217ENST00000611848 GPR15P49685 360 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 MFAP3P55082 362 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 ORC1Q13415 861 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 PRSS36Q5K4E3 855 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 ARHGAP17Q68EM7 881 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 TMEM270Q6UE05 265 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 PAQR9Q6ZVX9 377 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 GET4Q7L5D6 327 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-217ENST00000611848 TMC8Q8IU68 726 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 ARHGEF19Q8IW93 802 aa9.31□□□□□ -0.92
SMAD4-217ENST00000611848 NOA1Q8NC60 698 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms