RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 AP1B1Q10567 949 aa6.63□□□□□ -1.35
SNX13-213ENST00000611725 BST2Q10589 180 aaKnown RBP6.63□□□□□ -1.35
SNX13-213ENST00000611725 TARBP2Q15633 366 aaKnown RBP6.63□□□□□ -1.35
SNX13-213ENST00000611725 VSTM1Q6UX27 236 aa6.63□□□□□ -1.35
SNX13-213ENST00000611725 DLK2Q6UY11 383 aa6.63□□□□□ -1.35
SNX13-213ENST00000611725 METTL23Q86XA0 190 aa6.63□□□□□ -1.35
SNX13-213ENST00000611725 VPS39Q96JC1 886 aa6.63□□□□□ -1.35
SNX13-213ENST00000611725 RNF157Q96PX1 679 aa6.63□□□□□ -1.35
SNX13-213ENST00000611725 ELOVL4Q9GZR5 314 aa6.63□□□□□ -1.35
SNX13-213ENST00000611725 SIK2Q9H0K1 926 aa6.63□□□□□ -1.35
SNX13-213ENST00000611725 PDLIM7Q9NR12 457 aa6.63□□□□□ -1.35
SNX13-213ENST00000611725 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.63□□□□□ -1.35
SNX13-213ENST00000611725 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.63□□□□□ -1.35
SNX13-213ENST00000611725 ARHGEF37A1IGU5 675 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 TNPO2O14787 897 aaKnown RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 GPC4O75487 556 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 USP2O75604 605 aaPredicted RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 LUC7L3O95232 432 aaKnown RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 SKIP12755 728 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 XRCC4Q13426 336 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 TXNRD3NBQ6F5E7 133 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 KCNT2Q6UVM3 1135 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 AGAP3Q96P47 875 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 SRPK1Q96SB4 655 aaKnown RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 VCXQ9H320 206 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 RNPEPQ9H4A4 650 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 CCDC195A0A1B0GUA6 201 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 FOXO6A8MYZ6 492 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 CTSHP09668 335 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 SRGAP2BP0DMP2 458 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 TCF4P15884 667 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 CALRP27797 417 aaKnown RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 STX3Q13277 289 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 MAP1SQ66K74 1059 aaPredicted RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 LCLAT1Q6UWP7 414 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 ZNF410Q86VK4 478 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 CCNJLQ8IV13 435 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 UNC45BQ8IWX7 931 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 CPT1BQ92523 772 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 TWNKQ96RR1 684 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 EPAS1Q99814 870 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 HERPUD2Q9BSE4 406 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 MINDY3Q9H8M7 445 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 LGALS13Q9UHV8 139 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 ADAMTS5Q9UNA0 930 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 INPP5FQ9Y2H2 1132 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 RPS6KL1Q9Y6S9 549 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 TTLL13PA6NNM8 815 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 TCEA3O75764 348 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 HSPA4LO95757 839 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 BAG2O95816 211 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 PDK4Q16654 411 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 SLC2A14Q8TDB8 520 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 LRRC39Q96DD0 335 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 PGBD4Q96DM1 585 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 ZNF317Q96PQ6 595 aaPredicted RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 SNTG2Q9NY99 539 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 MTO1Q9Y2Z2 717 aaKnown RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 NWD2Q9ULI1 1742 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 CNTNAP2Q9UHC6 1331 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 EDF1O60869 148 aaKnown RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 MICAL2O94851 1124 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 C22orf31O95567 290 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 IVDP26440 423 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 EPHB2P29323 1055 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 EPHX2P34913 555 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 TPI1P60174 286 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 GEN1Q17RS7 908 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 RWDD4Q6NW29 188 aaKnown RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 RAPH1Q70E73 1250 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 PLEKHH3Q7Z736 793 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 CCDC33Q8N5R6 958 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 TMEM174Q8WUU8 243 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 ZNF669Q96BR6 464 aaPredicted RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 GRID1Q9ULK0 1009 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 L3MBTL1Q9Y468 752 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 TOGARAM1Q9Y4F4 1720 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 SPECC1L-ADORA2AF8WAN1 911 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 PCSK1P29120 753 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 ARL1P40616 181 aaPredicted RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 GPD2P43304 727 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 SULT1E1P49888 294 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 EPHB1P54762 984 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 FAAP100Q0VG06 881 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 MTDHQ86UE4 582 aaKnown RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 HSFY1Q96LI6 401 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 SNRNP25Q9BV90 132 aaKnown RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 DDIT4Q9NX09 232 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 HEY2Q9UBP5 337 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 KPNA7A9QM74 516 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 M0QYT0 321 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 TM9SF1O15321 606 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 BANF1O75531 89 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 UNC5CO95185 931 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 ARIH2O95376 493 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 TARSP26639 723 aaKnown RBP6.62□□□□□ -1.35
SNX13-213ENST00000611725 OGDHQ02218 1023 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 KDSRQ06136 332 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 FSTL1Q12841 308 aa6.62□□□□□ -1.35
SNX13-213ENST00000611725 RIPK1Q13546 671 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms