RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 PARVAQ9NVD7 372 aa16.8■□□□□ 0.28
CLTCL1-207ENST00000611723 UVRAGQ9P2Y5 699 aa16.8■□□□□ 0.28
CLTCL1-207ENST00000611723 TFR2Q9UP52 801 aa16.8■□□□□ 0.28
CLTCL1-207ENST00000611723 CHD9Q3L8U1 2897 aa16.8■□□□□ 0.28
CLTCL1-207ENST00000611723 MTCL1Q9Y4B5 1905 aaKnown RBP16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 A0A0U1RQJ8 604 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 FAM92AA1XBS5 289 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 SIGLEC16A6NMB1 481 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 RFXAPO00287 272 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 KRT86O43790 486 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 RTN3O95197 1032 aaPredicted RBP16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 LCP1P13796 627 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 ATF6P18850 670 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 SLC5A3P53794 718 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 HADHBP55084 474 aaKnown RBP16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 MRPS5P82675 430 aaKnown RBP16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 SLC6A3Q01959 620 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 ADIGQ0VDE8 80 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 MAMLD1Q13495 774 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 DUSP6Q16828 381 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 PPP1R15BQ5SWA1 713 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 CYP4A22Q5TCH4 519 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 OR6B2Q6IFH4 312 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 OLFML1Q6UWY5 402 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 FAM183BPQ6ZVS7 135 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 ARCQ7LC44 396 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 ZSCAN30Q86W11 494 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 SCUBE3Q8IX30 993 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 RNF10Q8N5U6 811 aaKnown RBP16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 ATRIPQ8WXE1 791 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 RFFLQ8WZ73 363 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 IRGQQ8WZA9 623 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 KHSRPQ92945 711 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 FBXO44Q9H4M3 255 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 MRPL47Q9HD33 250 aaKnown RBP16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 ASNSD1Q9NWL6 643 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 YIPF1Q9Y548 306 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 INSL5Q9Y5Q6 135 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 SCINQ9Y6U3 715 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 MUC3AQ02505 3323 aa16.79■□□□□ 0.28
CLTCL1-207ENST00000611723 PRRG1O14668 218 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 SART1O43290 800 aaKnown RBP16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 SOAT2O75908 522 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 ZBED1O96006 694 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 GLI1P08151 1106 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 POU3F3P20264 500 aaPredicted RBP16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 ALDH1A3P47895 512 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 DAOAP59103 153 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 PLD1Q13393 1074 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 EFHC1Q5JVL4 640 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 SDHAF4Q5VUM1 108 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 DENND5BQ6ZUT9 1274 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 SIX6OS1Q8N1H7 587 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 SCAMP5Q8TAC9 235 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 SLC35G2Q8TBE7 412 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 TTLL2Q9BWV7 592 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 ULBP1Q9BZM6 244 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 TLE6Q9H808 572 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 TRMT1Q9NXH9 659 aaKnown RBP16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 EHD2Q9NZN4 543 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 DPP7Q9UHL4 492 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 TMEM59LQ9UK28 342 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 SCML2Q9UQR0 700 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 ASB3Q9Y575 518 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 DUSP10Q9Y6W6 482 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 CHD7Q9P2D1 2997 aa16.78■□□□□ 0.28
CLTCL1-207ENST00000611723 PATJQ8NI35 1801 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 FAM170AA1A519 330 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 SLC38A8A6NNN8 435 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 USP27XA6NNY8 438 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 PIK3R2O00459 728 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 PAPLNO95428 1278 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 ABL1P00519 1130 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 SPATA31D3P0C874 917 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 CSH1P0DML2 217 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 CSH2P0DML3 217 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 KRT3P12035 628 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 EPHB3P54753 998 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 KCNC3Q14003 757 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 LLGL2Q6P1M3 1020 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 DNAJC24Q6P3W2 148 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 SPATA31D4Q6ZUB0 917 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 BEND5Q7L4P6 421 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 SLC26A9Q7LBE3 791 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 BHLHA9Q7RTU4 235 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 ADGRD2Q7Z7M1 963 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 PHLDB2Q86SQ0 1253 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 FEZF2Q8TBJ5 459 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 PPP2R3CQ969Q6 453 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 FAM122AQ96E09 287 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 MYRFLQ96LU7 910 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 NUP85Q9BW27 656 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 MYO1AQ9UBC5 1043 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 SALL4Q9UJQ4 1053 aa16.77■□□□□ 0.28
CLTCL1-207ENST00000611723 TMEM191CA6NGB0 347 aa16.76■□□□□ 0.27
CLTCL1-207ENST00000611723 PER2O15055 1255 aa16.76■□□□□ 0.27
CLTCL1-207ENST00000611723 ATMINO43313 823 aaPredicted RBP16.76■□□□□ 0.27
CLTCL1-207ENST00000611723 ZMYND10O75800 440 aa16.76■□□□□ 0.27
CLTCL1-207ENST00000611723 CSPG5O95196 566 aa16.76■□□□□ 0.27
CLTCL1-207ENST00000611723 C8AP07357 584 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms