RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 MAP3K4Q9Y6R4 1608 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 MGRN1O60291 552 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 TRMUO75648 421 aaKnown RBP20.84■□□□□ 0.93
COL15A1-205ENST00000610452 NME5P56597 212 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 NCF4Q15080 339 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 THOC7Q6I9Y2 204 aaKnown RBP20.84■□□□□ 0.93
COL15A1-205ENST00000610452 FAM13CQ8NE31 585 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 BHLHE22Q8NFJ8 381 aaPredicted RBP20.84■□□□□ 0.93
COL15A1-205ENST00000610452 BEST2Q8NFU1 509 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 CITED4Q96RK1 184 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 TRIM54Q9BYV2 358 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 NEO1Q92859 1461 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 SUPT3HB4E1H0 165 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 PARNO95453 639 aaKnown RBP20.84■□□□□ 0.93
COL15A1-205ENST00000610452 LYNP07948 512 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 CNTFP26441 200 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 FAXCQ5TGI0 409 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 SLAIN2Q9P270 581 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 AGO2Q9UKV8 859 aaKnown RBP20.84■□□□□ 0.93
COL15A1-205ENST00000610452 SERPINE1P05121 402 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 SPIDRQ14159 915 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 FAM83EQ2M2I3 478 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 CROTQ9UKG9 612 aa20.84■□□□□ 0.93
COL15A1-205ENST00000610452 AP3M2P53677 418 aa20.83■□□□□ 0.93
COL15A1-205ENST00000610452 BMPR2Q13873 1038 aa20.83■□□□□ 0.93
COL15A1-205ENST00000610452 SCARF1Q14162 830 aa20.83■□□□□ 0.93
COL15A1-205ENST00000610452 SNX32Q86XE0 403 aa20.83■□□□□ 0.93
COL15A1-205ENST00000610452 FRMD8P1Q9BZ68 369 aaPredicted RBP20.83■□□□□ 0.93
COL15A1-205ENST00000610452 DCP1AQ9NPI6 582 aaPredicted RBP20.83■□□□□ 0.93
COL15A1-205ENST00000610452 DCXO43602 365 aa20.83■□□□□ 0.93
COL15A1-205ENST00000610452 FGFR3P22607 806 aa20.83■□□□□ 0.93
COL15A1-205ENST00000610452 SLC25A3Q00325 362 aa20.83■□□□□ 0.93
COL15A1-205ENST00000610452 CAMK1DQ8IU85 385 aa20.83■□□□□ 0.93
COL15A1-205ENST00000610452 ZNF398Q8TD17 642 aa20.83■□□□□ 0.93
COL15A1-205ENST00000610452 SNX17Q15036 470 aa20.83■□□□□ 0.93
COL15A1-205ENST00000610452 ZNF57Q68EA5 555 aaPredicted RBP20.83■□□□□ 0.93
COL15A1-205ENST00000610452 ZNF677Q86XU0 584 aa20.83■□□□□ 0.93
COL15A1-205ENST00000610452 ACSF2Q96CM8 615 aaPredicted RBP20.83■□□□□ 0.93
COL15A1-205ENST00000610452 KCTD14Q9BQ13 255 aaPredicted RBP20.83■□□□□ 0.93
COL15A1-205ENST00000610452 AFF4Q9UHB7 1163 aaKnown RBP20.83■□□□□ 0.93
COL15A1-205ENST00000610452 AP4B1Q9Y6B7 739 aa20.83■□□□□ 0.93
COL15A1-205ENST00000610452 COX10Q12887 443 aa20.83■□□□□ 0.92
COL15A1-205ENST00000610452 MYBPC2Q14324 1141 aa20.83■□□□□ 0.92
COL15A1-205ENST00000610452 EPC2Q52LR7 807 aa20.83■□□□□ 0.92
COL15A1-205ENST00000610452 SUSD4Q5VX71 490 aa20.83■□□□□ 0.92
COL15A1-205ENST00000610452 C15orf38-AP3S2A0A0A6YYH1 394 aa20.83■□□□□ 0.92
COL15A1-205ENST00000610452 BTN3A3O00478 584 aa20.83■□□□□ 0.92
COL15A1-205ENST00000610452 DDX3XO00571 662 aaKnown RBP eCLIP20.83■□□□□ 0.92
COL15A1-205ENST00000610452 INPP4BO15327 924 aa20.83■□□□□ 0.92
COL15A1-205ENST00000610452 MTMR1Q13613 665 aa20.83■□□□□ 0.92
COL15A1-205ENST00000610452 ARPINQ7Z6K5 226 aa20.83■□□□□ 0.92
COL15A1-205ENST00000610452 SUPT7LO94864 414 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 IL12AP29459 219 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 PTPN7P35236 360 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 RPA3P35244 121 aaPredicted RBP20.82■□□□□ 0.92
COL15A1-205ENST00000610452 PRMT9Q6P2P2 845 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 AAGABQ6PD74 315 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 FGD2Q7Z6J4 655 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 CCDC33Q8N5R6 958 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 DCAF4Q8WV16 495 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 SRPK1Q96SB4 655 aaKnown RBP20.82■□□□□ 0.92
COL15A1-205ENST00000610452 PNPLA3Q9NST1 481 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 DNM1LO00429 736 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 UBDO15205 165 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 ADAM17P78536 824 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 DGKDQ16760 1214 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 STK32CQ86UX6 486 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 TTC39CQ8N584 583 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 MTG1Q9BT17 334 aaPredicted RBP20.82■□□□□ 0.92
COL15A1-205ENST00000610452 JMJD4Q9H9V9 463 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 DSEQ9UL01 958 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 FOXN3O00409 490 aaPredicted RBP20.82■□□□□ 0.92
COL15A1-205ENST00000610452 CDK7P50613 346 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 HLFQ16534 295 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 EHD3Q9NZN3 535 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 EME2A4GXA9 379 aaPredicted RBP20.82■□□□□ 0.92
COL15A1-205ENST00000610452 KRT20P35900 424 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 PKNOX1P55347 436 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 DUOXA2Q1HG44 320 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 ZNF568Q3ZCX4 644 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 TTC7BQ86TV6 843 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 ERO1BQ86YB8 467 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 ASAP3Q8TDY4 903 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 SH3TC2Q8TF17 1288 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 TUFT1Q9NNX1 390 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 TBC1D22BQ9NU19 505 aa20.82■□□□□ 0.92
COL15A1-205ENST00000610452 MEA1Q16626 185 aa20.81■□□□□ 0.92
COL15A1-205ENST00000610452 BROXQ5VW32 411 aa20.81■□□□□ 0.92
COL15A1-205ENST00000610452 ATG16L2Q8NAA4 619 aa20.81■□□□□ 0.92
COL15A1-205ENST00000610452 VPS33AQ96AX1 596 aa20.81■□□□□ 0.92
COL15A1-205ENST00000610452 NUAK2Q9H093 628 aa20.81■□□□□ 0.92
COL15A1-205ENST00000610452 TUBGCP4Q9UGJ1 667 aa20.81■□□□□ 0.92
COL15A1-205ENST00000610452 TRIM17Q9Y577 477 aa20.81■□□□□ 0.92
COL15A1-205ENST00000610452 SHROOM2Q13796 1616 aa20.81■□□□□ 0.92
COL15A1-205ENST00000610452 UBAP1LF5GYI3 381 aa20.81■□□□□ 0.92
COL15A1-205ENST00000610452 DFFAO00273 331 aa20.81■□□□□ 0.92
COL15A1-205ENST00000610452 RRP1BQ14684 758 aaKnown RBP20.81■□□□□ 0.92
COL15A1-205ENST00000610452 FAM98BQ52LJ0 330 aaKnown RBP20.81■□□□□ 0.92
COL15A1-205ENST00000610452 SH3BP5LQ7L8J4 393 aa20.81■□□□□ 0.92
COL15A1-205ENST00000610452 SETD9Q8NE22 299 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms